Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01104 ATGGGAAGGAGAAATGGAGGAAGGCCACTGCATGAAATTCTTCGTCGTCGCCTTGAGTCCTGTAAATCCAGGTACTCAACTGTTGATGAAATTGTAAACCATCTTCGCGCAAATTACCCTGATTACCAGCGAACAAAACAGCAAACTTTGACTCGATTTGTTCAAGAAGCTTTGGAGTCATCTAAGCGTGGGAACCAGCAATTCAACAGAAAGCCCAATACTCCCATATTGAAGCCTAACGGTTCAGAAGATGATGATGAAGAAGAAGAAGAAGTTCGAAGTGCATCTCGAAAGAGGCGCAAGAAAGTTGATGAAAGTGAAGAGAGATTGCAAAAAATGGAGAGTTTACGCCTTCAAAAGTTACAAAGGGATCGGAGCCGCCGTTTATCAACCTCTTCTCCCTCAACTTCTAGTCCGTCATCAGAGTCTGAAGAGAGTGATGGCGAAGATGGGACCGTGTCCACATCAGAGGATGCAATTTATGAGGAGAAAGTGGAACCAGCCTTTGACTTGACGAAAACAATGTTACGGGCTTCATACTCAGGAACAAAGAATGTGAAATCTACAGCAGAGGAGAAAAACGTTGAAGTAGAGGTGACTAATAAAAATAAGGCAACTAAGATTGGTGCTATGGATGGGGTTGGAGGTAACATGAAAGATGATTTGGAACCAAAAAGGCAATTGACAGGTTCAGTTTCAAATGGCAATGGTGATGTTGAGGTCAAGAGGAAGGGTGGCCCTAGATTCAAAGATTTGGGTGGGATGGAGAAGGTGGTGGAGGAATTGAAGATGGAAGTAATTGTTCCTCTTTATCATCCACAGTTGCCAATAAAATTAGGGATATCAGCTACAGAAGTGGTTTCCGGAGTTTCAGGAGCATCTGAAGAAAGCATTAGGGAGCTTTTTTCTAAAGCATACAGGACTGCCCCATCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAATTGCTTACCTCAATGGATCAATCGACTATGCTCTTACAACCAGATGGTAGTTCAGAAAGTTCTGATACTCATCCTGGCTATATTCTTGTTATCGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCTTGAGAAGGCCCGGACGATTTGACCGTGAAATTTTTCTTGGTGTTCCTAATGAATATGCTAGGGAGGAGATCTTGTCTGTTATTACTCGCAATCTGACTGTGGAGGGTTCATTTGATCTTAGAAAAATAGCTAGGTCTACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTTGTTGACAAGGCTGGTAACCTAGCAATGAAAAGAATTCTTCATGAAAGGAAACGTGAATTATCACAAGATCTTCTAGATGAGCATGGTGAAGGTTGGTGGAGGGAACCTTGGTTACCAGAAGAGATGGATAAGCTTGTCATCAAAATGTCAGATTTTGAGGAAGCAGTCAAATTGGTTCAACCTTCATCAAGAAGAGAAGGGTTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTGGTGGGCTTGATCTTATAAGACAAGAGTTTGAGCGTTATATTGTTAGACGCATAAAATATCCAGACGATTATAAGGAATTTGGGGTGGATCTTGAGACGGGATTTTTGCTCTATGGACCACCAGGGTGTGGTAAAACACTGATTGCCAAAGCCGTTGCCAATGAGGCAGGAGCTAATTTTATTCATATCCAGGGCCCTGAACTTCTAAATAAATATGTTGGAGAAAGCGAGCTAGCAGTACGGACACTGTTTAGTCGTGCAAGAACATGTTCACCTTGTATTCTCTTTTTTGATGAGGTGGATGCACTGACAACCAAACGTGGTAAAGAAGGGGGATGGATTGTTGAGAGACTGTTGAACCAGTTACTTGTTGAGTTAGACGGTGCAGATCAAAGGCAAGGTGTTTTTGTTATTGGGGCTACTAACAGACCTGAGGTGATGGACCGTGCGGTCCTTCGGCCTGGTAGGTTAGGTAAACTTCTGTATGTTCCTCTGCCAAGCTCAAATGAGCGAGGTTTGATCTTAAAAGCTCTTGCAAGAAAGAAGCCAATTGATGTCAACGTGGATTTGTGTGCCATTGGAAGAATGGAAGCTTGTGAAAATCTCAGCGGTGCTGATCTTGCTGCATTGATGAACGAAGCAGCGCTGGCTGCGGCTGAAGAGAAGTCGGCATCAACAGAGAGAACTTCGGATGCATTGACCATCAAGTTGAGCCATTTTGAGACTGCTCTCACTAAAATCTCCCCCTCGGTGACAGACGCGCAAAAACAATACTATCAGCGATTGGCAGAGACTTTTAAGGCTGCATGA 2367 0.4305 MGRRNGGRPLHEILRRRLESCKSRYSTVDEIVNHLRANYPDYQRTKQQTLTRFVQEALESSKRGNQQFNRKPNTPILKPNGSEDDDEEEEEVRSASRKRRKKVDESEERLQKMESLRLQKLQRDRSRRLSTSSPSTSSPSSESEESDGEDGTVSTSEDAIYEEKVEPAFDLTKTMLRASYSGTKNVKSTAEEKNVEVEVTNKNKATKIGAMDGVGGNMKDDLEPKRQLTGSVSNGNGDVEVKRKGGPRFKDLGGMEKVVEELKMEVIVPLYHPQLPIKLGISATEVVSGVSGASEESIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLLTSMDQSTMLLQPDGSSESSDTHPGYILVIGATNRPDAVDPALRRPGRFDREIFLGVPNEYAREEILSVITRNLTVEGSFDLRKIARSTPGFVGADLAALVDKAGNLAMKRILHERKRELSQDLLDEHGEGWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDIGGLDLIRQEFERYIVRRIKYPDDYKEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIQGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWIVERLLNQLLVELDGADQRQGVFVIGATNRPEVMDRAVLRPGRLGKLLYVPLPSSNERGLILKALARKKPIDVNVDLCAIGRMEACENLSGADLAALMNEAALAAAEEKSASTERTSDALTIKLSHFETALTKISPSVTDAQKQYYQRLAETFKAA 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01104 788 FunFam Cell division control protein 48 homolog C 398 506 - -
Accr13g01104 788 Pfam ATPase family associated with various cellular activities (AAA) 279 396 IPR003959 GO:0005524|GO:0016887
Accr13g01104 788 Pfam ATPase family associated with various cellular activities (AAA) 555 683 IPR003959 GO:0005524|GO:0016887
Accr13g01104 788 FunFam ATPase, AAA family protein 512 690 - -
Accr13g01104 788 Gene3D - 512 778 IPR027417 -
Accr13g01104 788 MobiDBLite consensus disorder prediction 226 247 - -
Accr13g01104 788 ProSitePatterns AAA-protein family signature. 654 672 IPR003960 GO:0005524|GO:0016887
Accr13g01104 788 Gene3D - 398 506 - -
Accr13g01104 788 MobiDBLite consensus disorder prediction 58 76 - -
Accr13g01104 788 Coils Coil 103 123 - -
Accr13g01104 788 MobiDBLite consensus disorder prediction 128 142 - -
Accr13g01104 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 785 IPR027417 -
Accr13g01104 788 MobiDBLite consensus disorder prediction 91 127 - -
Accr13g01104 788 CDD RecA-like_NVL_r2-like 522 682 - -
Accr13g01104 788 Gene3D - 685 764 - -
Accr13g01104 788 Gene3D - 257 396 IPR027417 -
Accr13g01104 788 PANTHER AAA-FAMILY ATPASE 88 786 - -
Accr13g01104 788 MobiDBLite consensus disorder prediction 58 164 - -
Accr13g01104 788 SMART AAA_5 550 686 IPR003593 GO:0016887
Accr13g01104 788 SMART AAA_5 46 399 IPR003593 GO:0016887
Accr13g01104 788 Pfam AAA+ lid domain 706 744 IPR041569 -
Accr13g01104 788 Pfam AAA+ lid domain 420 455 IPR041569 -
Accr13g01104 788 ProSitePatterns AAA-protein family signature. 367 385 IPR003960 GO:0005524|GO:0016887
Accr13g01104 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 505 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01104 Accr-Chr13 13741233 13746680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01104 485 784 Calmodulin-binding Proteins AT3G56690 42.623 2.07e-68 243