Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01097 ATGTCACATTCTGAGAAGCCCATTTCCGAGATAGGACTCGATGCTCTCAACGACCGATTCCACGACTCTTTGAGCTGTGAGGCTAACAAGCCGGATTTTCGAGAACTCGACTTGGGCTCGCCGGTTTCGCCATTGCGGACTCGTCACAGTGTACCTACTGCTAGTGCCAGTGGACTCACTACTACCAGTAGTAGTTCGAGTTCATCTGGATCGGTCTCTGGACGAAACGGGTACAAACCGGTCGCGAAACGATCTGATTACGATCCGAATAACCACTCCGGAGAACTCTCCGGCTCCGGTGAGAACAGTCCGACCGCCGCAGGGAATGCCAGGAACTTCAAATCGCCTCAAGCAAGATCAGATTCCAAGTCCACCCAACCGTTAATTTACTCCGGTCAAAGCTCCTCCGTGAATTCACCGCCGCCAAATTTCCTTCCCATAGGCAATATCTGTCCGTCCGGAAAGATTCTGAAGACCGCTGCTGCGGCCAGTCGGAGCTCCAAGACTGACATTTTGGGTTCTGGGATAGGATATTACGGCCATGGAAGCATAATGCGGGGCGGTGCGACTTCCAAAGGCAATGCTGGAGGAGCGACCTGCGCGGCTAACGCGAGGGCAAGTGGCGGTGGCGCCGTCACTGAGTCAGTGAAGCGAGCCGCGGTGAGTGTGGATCCAGAAGACGTGAAGAGAGCAGGGAACGAGCAGTACAAGAAGGGTCACTTCGCAGAGGCTCTGAGTCTATACGATCGAGCAATTGCATTATCCCCTGCTAACGCAGCCTACCGGAGCAACCGTGCAGCTGCATTGACGGGTTTGGGACGGTTGGCTGAGGCTGTGAGGGAGTGTGAGGAGGCTGTGAGGTTAGATCCCAATTATGGGAGGGCACATCAGCGTTTGGCTTCTCTTTTTCTAAGGTTAGGACGAATTGAGAATGCCAGGAAACATCTCTTCTGCCCTGGGCTGCCACCTGATCCTTCTGAGTTGCAGAAATTGCAACTAGTGGAGAAGCATTTCGGGAAATGTACAGATTCCAGGAAGGTAGGTGATTGGAAAAGTGTGCTCAGGGAAATTGATGCAGCCATTTCTTCTGGAGCAGACTCTTGTCCTGAGCTCTTAATGTGTAGAGCAGAAGCCCTTTTGAAACTCCATCAAGTTGATGATGCGGAATCAAGTCTGTTAAACAACCCCAAATTAGAACCATATACTAACTCCTCTTCACAGGCAAGATTTTTTGGGATACTTTCTGAAGCTTATTCTTTCTTTGTGAGAGCTCAGATTGAGGTGGCTCTGGGAAGATTTAAAAATGCTGTTACTGCTGCTGAGAAAGCTGGTCAGATTGATCCCCGAAACATCGAGGTTACTGTTTTGCTAAAAAATGTAAGGATGGTGGCTCGAGCTCGAGCTCAGGGCAATGATCTTTTCAAATCCGAAAGGTTCACTGAAGCTTGCTCAGCATATGGGGAAGGTTTGAGGCTGGATCCTTCAAACTCGGTTCTCTACTGCAATAGAGCAGCTTGCTGGTTTAAGCTTGGGCACTGGGAACAATCAATTGAGGATTGCAATCAAGCTTTACATTTCCAACCTAATTACACAAAAGCTCTTCTTCGTAGGGCTGCATCTAATAGCAAGTTAGAAAGGTGGGCGGAAGCTGTCAAAGATTATGAGATCTTGCGTAGAGATCTTCCGGATGACACTGAAGTGGCTGAAGCTCTGTTTCATGCAATATTGGCATTAAAGAAATCTCGTGGAGAGGAAGTGCATGATTTGAAATTTGGTGGTGAGGTGGAAGAAGTATCAGGTCTTGAGCAATTTAGAGCAGCAATAGCATTACCAGGTGTTTCTGTGGTCCATTTTGAAATTGCATCTAACCCACAATGCAAGCAAATCTCACCATTTATGGGTACATTATGTGGCCGCTATCCTTCCATCAACTTCCTCAAGGTGGATATTCAAGAATGCCCAACAGTTGCAACCGCTGAGAGCATTAGAATCGTACCAACATTCAAGATCTACAAGAATGGCTGTCGTGTGAAAGAAATCGTGTGTCCTAGTCACAACATGTTGGAACACTCTGTGAGGCATTACAGCTTTTAG 2094 0.4828 MSHSEKPISEIGLDALNDRFHDSLSCEANKPDFRELDLGSPVSPLRTRHSVPTASASGLTTTSSSSSSSGSVSGRNGYKPVAKRSDYDPNNHSGELSGSGENSPTAAGNARNFKSPQARSDSKSTQPLIYSGQSSSVNSPPPNFLPIGNICPSGKILKTAAAASRSSKTDILGSGIGYYGHGSIMRGGATSKGNAGGATCAANARASGGGAVTESVKRAAVSVDPEDVKRAGNEQYKKGHFAEALSLYDRAIALSPANAAYRSNRAAALTGLGRLAEAVRECEEAVRLDPNYGRAHQRLASLFLRLGRIENARKHLFCPGLPPDPSELQKLQLVEKHFGKCTDSRKVGDWKSVLREIDAAISSGADSCPELLMCRAEALLKLHQVDDAESSLLNNPKLEPYTNSSSQARFFGILSEAYSFFVRAQIEVALGRFKNAVTAAEKAGQIDPRNIEVTVLLKNVRMVARARAQGNDLFKSERFTEACSAYGEGLRLDPSNSVLYCNRAACWFKLGHWEQSIEDCNQALHFQPNYTKALLRRAASNSKLERWAEAVKDYEILRRDLPDDTEVAEALFHAILALKKSRGEEVHDLKFGGEVEEVSGLEQFRAAIALPGVSVVHFEIASNPQCKQISPFMGTLCGRYPSINFLKVDIQECPTVATAESIRIVPTFKIYKNGCRVKEIVCPSHNMLEHSVRHYSF 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01097 697 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 694 IPR044534 -
Accr13g01097 697 Pfam Tetratricopeptide repeat 499 530 IPR001440 GO:0005515
Accr13g01097 697 Pfam Thioredoxin 603 685 IPR013766 -
Accr13g01097 697 MobiDBLite consensus disorder prediction 46 75 - -
Accr13g01097 697 Pfam Tetratricopeptide repeat 231 291 - -
Accr13g01097 697 MobiDBLite consensus disorder prediction 91 143 - -
Accr13g01097 697 SMART tpr_5 417 450 IPR019734 GO:0005515
Accr13g01097 697 SMART tpr_5 497 530 IPR019734 GO:0005515
Accr13g01097 697 SMART tpr_5 463 496 IPR019734 GO:0005515
Accr13g01097 697 SMART tpr_5 259 292 IPR019734 GO:0005515
Accr13g01097 697 SMART tpr_5 225 258 IPR019734 GO:0005515
Accr13g01097 697 SMART tpr_5 531 564 IPR019734 GO:0005515
Accr13g01097 697 SMART tpr_5 369 402 IPR019734 GO:0005515
Accr13g01097 697 SUPERFAMILY TPR-like 226 316 IPR011990 GO:0005515
Accr13g01097 697 ProSiteProfiles TPR repeat profile. 225 258 IPR019734 GO:0005515
Accr13g01097 697 Gene3D Glutaredoxin 582 695 - -
Accr13g01097 697 CDD TRX_family 602 683 - -
Accr13g01097 697 Gene3D Tetratricopeptide repeat domain 223 581 IPR011990 GO:0005515
Accr13g01097 697 MobiDBLite consensus disorder prediction 28 143 - -
Accr13g01097 697 FunFam TPR repeat-containing thioredoxin TTL4 589 696 - -
Accr13g01097 697 SUPERFAMILY TPR-like 368 554 IPR011990 GO:0005515
Accr13g01097 697 SUPERFAMILY Thioredoxin-like 500 694 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01097 Accr-Chr13 13607744 13611052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01097 462 607 U-box Gene Family AT3G07370 28.415 2.69e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01097 - - qsa:O6P43_029173 1060.06