Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01070 ATGGCACATTTACCTCCTAAGATACCCACCATGTCCCAGAATTGGCCTCCCTCGCTTCCTCACCAGAAGTTACCCAATTTCAATCCAACTCAACAATTTCAGCAACAGAACTCACTACCGCCAACTTGGGTGGATGAGTTTCTTGACTTCTCGTCGGCGCGGCGGGGGGCTCACCGGCGGTCTGCGAGTGACTCCATTGCCTACCTCGACACGGCATTCCTTGCGGAATGTCGGAACCCGGTGGCCGGAGCTCATCATCATCAAGGTGGGTTTGATAGGCTTGACGATGACCAGCTCATGTCCATGTTCTCCGATGATATTGGCTCGGTCTCATTGCCGCCGTCTTCTGCCACCGCGTCGAACCCGTCTACGCCCTCCGATGACCAGAATAGCAATAATGAGGAGAAGCCTATGGTGCTTGACGATGTCGTTTTTCCTACACAAGACCTTCCATTGCAAAAACAGCTCAAGCATGAACCGGGGGAGGTGGAGAGCGCATGCAAGAATGAGAGTGATACTTCACTTCCGCCGCCGCCACCCCCCTTGGTAGGTGGTGGGGGAGAAACTATCCTGGATCCAAAAAGAGTTAAAAGGGTCTTGGCAAATCGGCAGTCAGCTCAGAGATCCAGGGTGAGAAAGCTGCAATACATTTCTGATTTAGAAAGAAGCGTATCAACTTTGCAGACGGAGGTATCAGCATTGTCGCCGAGGGTAGCATTCTTGGACCACCAACGTTTGATTCTGAACGTGGACAATAGCACCTTAAAGCAACGTATTGCTGCTTTGGCTCAAGACAAGATTTTCAAAGACGCTCACCACGAAGCACTAAAGAAGGAGATAGAGAGACTAAGACAAATCTATCAGCAGCAGCAACAACAACAAAACCTTCATAATATGGAGAAGTCATCATCAGCAAACAATAATAATAATAATAGTAATGGGCATCTACAGCTTCACTCTACTCCACCACCACCACCTACGACGATGACGTCGGCACCACCGCCAGCACAGGCATAA 1017 0.4985 MAHLPPKIPTMSQNWPPSLPHQKLPNFNPTQQFQQQNSLPPTWVDEFLDFSSARRGAHRRSASDSIAYLDTAFLAECRNPVAGAHHHQGGFDRLDDDQLMSMFSDDIGSVSLPPSSATASNPSTPSDDQNSNNEEKPMVLDDVVFPTQDLPLQKQLKHEPGEVESACKNESDTSLPPPPPPLVGGGGETILDPKRVKRVLANRQSAQRSRVRKLQYISDLERSVSTLQTEVSALSPRVAFLDHQRLILNVDNSTLKQRIAALAQDKIFKDAHHEALKKEIERLRQIYQQQQQQQNLHNMEKSSSANNNNNNSNGHLQLHSTPPPPPTTMTSAPPPAQA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01070 338 MobiDBLite consensus disorder prediction 319 338 - -
Accr13g01070 338 MobiDBLite consensus disorder prediction 14 36 - -
Accr13g01070 338 SUPERFAMILY Leucine zipper domain 194 248 IPR046347 GO:0003700|GO:0006355
Accr13g01070 338 CDD bZIP_plant_RF2 195 245 IPR044759 GO:0003700|GO:0006355
Accr13g01070 338 MobiDBLite consensus disorder prediction 288 318 - -
Accr13g01070 338 MobiDBLite consensus disorder prediction 288 338 - -
Accr13g01070 338 Pfam bZIP transcription factor 194 239 IPR004827 GO:0003700|GO:0006355
Accr13g01070 338 Gene3D - 193 265 - -
Accr13g01070 338 MobiDBLite consensus disorder prediction 157 188 - -
Accr13g01070 338 MobiDBLite consensus disorder prediction 104 134 - -
Accr13g01070 338 MobiDBLite consensus disorder prediction 104 133 - -
Accr13g01070 338 MobiDBLite consensus disorder prediction 1 36 - -
Accr13g01070 338 FunFam Basic leucine zipper 61 193 266 - -
Accr13g01070 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 244 IPR004827 GO:0003700|GO:0006355
Accr13g01070 338 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Accr13g01070 338 Coils Coil 273 293 - -
Accr13g01070 338 PANTHER BASIC LEUCINE ZIPPER 34 1 321 - -
Accr13g01070 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 197 212 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01070 Accr-Chr13 13060799 13062669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01070 1 272 bZIP Transcription Factor Family AT3G58120 52.333 1.32e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr13g01070 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01070 - - pcin:129314259 424.476