Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01053 ATGGAGTCCCATTACCCCTCCTCCTCCGACAACCATGAAGCTGTTTTACCTCCTGGCTTTCGCTTCCACCCTACAGATGAAGAACTCATCACTTACTACCTCCTCAAGAAAGTCCTCGACAACAACTTCTCTGGTAGAGCCATCGCTGAAGTTGACCTCAACAAATGTGAGCCCTGGGAGCTTCCTGAGAAAGCGAAGATGGGAGAGAAGGAGTGGTATTTCTTTAGTCTTCGAGATAGGAAGTACCCAACTGGGCTGAGAACTAATAGGGCTACAGAAGCAGGTTACTGGAAGGCCACTGGGAAAGACAGAGAAATCTACAGCTCTAAGATTTGTGGATTAGTTGGCATGAAGAAGACTCTTGTCTTCTACAGAGGAAGAGCCCCTAAAGGCGAGAAAAGCAACTGGGTTATGCACGAGTATCGCCTTGAAGGAAAATTCGCCTACCATTACCTCTCTCGCTCTTCCAAGGATGAGTGGGTCATTTCCCGAGTTTTCCAGAAGAGCGGCACCGGCAACGGCGGCAGCTCCGCCGCCATATCCTCTTGTAGTGGCTCAAAGAATAAGACCCGAAACATCATGAGCTCTTCTTCCAACTTGAGTCTCTACCCGGCTGAGCCGGGTTCTCCTTCCTCCGTCTACCTTCCACCCCTGCTTGATTCCTCTCCATTCTCGGCCGCCGCCGCCGCAAGCAGCACCGCCGCAGACAGTTGCTCTAATACTTATGACAGCTTAATTACCCCAAGAGAGCACGTGTCCTGTTTCTCCACAATTTCTGCCACCGCCAGCAACAACTACGGCTTTGACTTGCCCCCCGCCGCACCGCAGCTGTCTGTCACGGTGGATCCCTTTGCTCGTTTTCAGAGAAACGGCGGTGTCTCCTTCCCGAGCCTGAGGTCGCTCCATCTGCAAGACAACCTTCAGCTTCCCTTCTTCATCCCGCCGCCGCCGCCGCAACAACCCATCCATGGTGTTCCTGTTGACATGAACTGGGCTACCCCGGTGACCGAGCAGAGGGTGGCGGACGGTGGCTCCGGCTTGACGACTGGTTTGGGTGGCTCCGAGCTTGATTGCATGTGGGGATTCTAA 1089 0.5354 MESHYPSSSDNHEAVLPPGFRFHPTDEELITYYLLKKVLDNNFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKICGLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSGTGNGGSSAAISSCSGSKNKTRNIMSSSSNLSLYPAEPGSPSSVYLPPLLDSSPFSAAAAASSTAADSCSNTYDSLITPREHVSCFSTISATASNNYGFDLPPAAPQLSVTVDPFARFQRNGGVSFPSLRSLHLQDNLQLPFFIPPPPPQQPIHGVPVDMNWATPVTEQRVADGGSGLTTGLGGSELDCMWGF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01053 362 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Accr13g01053 362 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
Accr13g01053 362 SUPERFAMILY NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Accr13g01053 362 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Accr13g01053 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 229 - -
Accr13g01053 362 FunFam NAC domain-containing protein 100-like 25 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01053 Accr-Chr13 12839298 12841251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01053 4 362 NAC Transcription Factor Family AT5G53950 53.264 2.91e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr13g01053 NAM 6.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01053 - - pcin:129313031 540.421