Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01051 ATGGCTCCTAGGGATAGACCCGCTCCTCTCGCCGCCTCCAACCCGCCCAACTCTGCCAAGGAGATCCGGTACAGAGGTGTCCGCAAGAGGCCGTGGGGGCGTTACGCGGCGGAGATTCGTGATCCTGGCAAGAAAACACGTGTTTGGTTGGGAACTTTTGATACGGCTGAGGAGGCAGCGCGTGCTTACGACGCGGCGGCCAGAGAGTTCCGTGGCGTTAAGGCCAAGACTAATTTCCCTTGTCCGTCTGAACTTCCGAACAACTTCAGTCGCAGCCCTAGCCAGAGCAGCACGCTTGAATCATCGTCGCCGCCGCCGCCAGTTGCTGCTCCCCCGCCGCTAGAACTCTCCCTTGGAACGTTCACTTCCGGCGGCGCCTTGGGGTTCCCTGTCATTCCGGTGGCTCGCCCGGTCATGTTTTTTGATGCGTTTGCTCGAGCAGACCGTGTGAAGGCAGCTGCCGGTCGCCGTGAGATGTGCGGGTTTGATCGGCCTGTTGCAGACTTCCGCCGCTCCGTCGGCGACGGTGGTGCCCACAGTGACTCCGATTCGTCCTCTGTCGTGGACTACGAGCGTGCTTCGCCACGAACAGTCTTAGATCTTGACCTCAATGTCCCTCCTCCGTCAGAAGTAGCCTGA 639 0.6041 MAPRDRPAPLAASNPPNSAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGVKAKTNFPCPSELPNNFSRSPSQSSTLESSSPPPPVAAPPPLELSLGTFTSGGALGFPVIPVARPVMFFDAFARADRVKAAAGRREMCGFDRPVADFRRSVGDGGAHSDSDSSSVVDYERASPRTVLDLDLNVPPPSEVA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01051 212 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Accr13g01051 212 MobiDBLite consensus disorder prediction 1 22 - -
Accr13g01051 212 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Accr13g01051 212 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Accr13g01051 212 MobiDBLite consensus disorder prediction 171 191 - -
Accr13g01051 212 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Accr13g01051 212 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Accr13g01051 212 FunFam Ethylene-responsive transcription factor 2 23 81 - -
Accr13g01051 212 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Accr13g01051 212 CDD AP2 23 80 IPR001471 GO:0003700|GO:0006355
Accr13g01051 212 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 189 - -
Accr13g01051 212 SUPERFAMILY DNA-binding domain 23 80 IPR016177 GO:0003677
Accr13g01051 212 MobiDBLite consensus disorder prediction 81 115 - -
Accr13g01051 212 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01051 Accr-Chr13 12791257 12791895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01051 6 142 AP2-EREBP Transcription Factor Family AT3G15210 63.758 2.39e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr13g01051 AP2 2.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01051 K09286 - qsa:O6P43_029132 211.46