Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01045 ATGGCTGAGGCAGCGGGTCTAGCTGAGGCAGCAGGATCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAACTCAAAAAAGAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAGATGGAAATTGCTGTTCTATCACAATGTCGTTGTCAATATATTACCGAGTATTATGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGTTCTGTAGCTGACCTACTTCAATCAGGCCCACCCCTTGATGAAGTATCAATTGCTTGCATTTTACGTGACTTGTTGCATGCCATTGATTATTTGCATGCTGAAGGAAAAATTCATAGAGACATCAAAGCAGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGCGTTTCTGCCCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTCATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTTAGTGACCTCCATCCTATGAGAGTGCTTTTCATCATACCACGTGAGAACCCACCACAGCTAGATGAACATTTTTCTCGTCCCATTAAAGAATTCGTTTCACTGTGTTTAAAAAAGCTTCCAGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACATCGTTTTATTCGAACTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAAAAGAAGGGGGAACACCTAGAAGTGGTCAAAGAGGGATGGGGGAGCCATCTGATACGATGAAAGTAGCAAGAAATTTAAGAGAGGAAGCTACTCAATCCATTCCCAGTGGGCAGGATAAAACCAGGAAAAATTATGGATGGGACTTCAGCATTGGTGGATCAGAGGGTACTGGAACTTTTTCCACTGTTGCACGGCCACCTCAGTATAGAGACAAGAAAACAGATGATTCACGATATCTACTGGACCAAAAGAAGGCAACAACAGACAGTGGCTATCTTGGGGGATCTTCATATAGAAATGCTCTTAGTGAATCACCAGAAACTTCCCTTGAAGATGATGAATTATCTGGTAATGGATCAGGAACTGTTGTTGTTCGATCTCCAAAAGGATCAAAATCATCAATCTTTCATGAGCAAAGCTCCCAGTCTAGTAGTCGCTATGGTTCTTTTGAAGATAGTTCTTCCAGTGGAACTATTGTTGTCCGTGGTCAGCATAATGATTATGACTCTTCACAGACACCGAGGTCCAGGCTGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGCGCCTCAAATCTTGCAGAGGCAAAGGCTGCTATCCTAAGGCCGAGGAAAGGAAATACCCGAGAGAGAATTGCACAGGGAAAGACTGGCAATGATGTGCAGGAAAGCAGAAGAGACCAAGTGACAAGCAGCCCTGATTCCTCAAGATCATCTCGTCTAAACAATGGTTCACAACAGGGAATTTCAAGATTGCGCCATGCTGATGAGGATCAAGACAATGGCAGAATATTGTCTTCCTCCATGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCCGATGATTTAGAAGGGTCTACCATACAAGAATTAATCAATTCACTCGAACACATGGAGCACATAAAGTCTGGATCATGTGATACTCTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGTTCGAAGGAATCTTCGTTTAAGGATCTGCAGCAGCTAGCAGCTCAATTATTCACTAAGACCAAGTCAGCTCCTGAAGAATCCCAAAATGCAACTGCAGAAGTTGATGCCAGGAAGAAACAACAGAACAGAGAATTTCATTCAAATAGCAACCTAGGCCCTCTTGCTAGATTTCTTCTCTCAAGATGGCAAGGTCAAACCTAA 2043 0.4239 MAEAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELKKEVAIKVIDLDESEDEIDDIQMEIAVLSQCRCQYITEYYGSYLHQTKLFIIMEYMAGGSVADLLQSGPPLDEVSIACILRDLLHAIDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKYQIKEGGTPRSGQRGMGEPSDTMKVARNLREEATQSIPSGQDKTRKNYGWDFSIGGSEGTGTFSTVARPPQYRDKKTDDSRYLLDQKKATTDSGYLGGSSYRNALSESPETSLEDDELSGNGSGTVVVRSPKGSKSSIFHEQSSQSSSRYGSFEDSSSSGTIVVRGQHNDYDSSQTPRSRLGLNERTANASLEDSASNLAEAKAAILRPRKGNTRERIAQGKTGNDVQESRRDQVTSSPDSSRSSRLNNGSQQGISRLRHADEDQDNGRILSSSMALSVLLIPSLKEAFADDLEGSTIQELINSLEHMEHIKSGSCDTLVKKLLQRLASSKESSFKDLQQLAAQLFTKTKSAPEESQNATAEVDARKKQQNREFHSNSNLGPLARFLLSRWQGQT 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01045 680 SUPERFAMILY Protein kinase-like (PK-like) 12 294 IPR011009 -
Accr13g01045 680 Coils Coil 48 68 - -
Accr13g01045 680 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01045 680 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Accr13g01045 680 MobiDBLite consensus disorder prediction 503 541 - -
Accr13g01045 680 MobiDBLite consensus disorder prediction 492 551 - -
Accr13g01045 680 FunFam serine/threonine-protein kinase dst1 isoform X1 12 299 - -
Accr13g01045 680 Gene3D Transferase(Phosphotransferase) domain 1 12 294 - -
Accr13g01045 680 MobiDBLite consensus disorder prediction 634 662 - -
Accr13g01045 680 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 633 - -
Accr13g01045 680 MobiDBLite consensus disorder prediction 377 393 - -
Accr13g01045 680 MobiDBLite consensus disorder prediction 356 371 - -
Accr13g01045 680 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01045 680 CDD STKc_MST3_like 13 287 - -
Accr13g01045 680 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01045 680 MobiDBLite consensus disorder prediction 282 467 - -
Accr13g01045 680 MobiDBLite consensus disorder prediction 400 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01045 Accr-Chr13 12717594 12726870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01045 1 680 MAP Kinase Kinase Kinase Kinase AT3G15220 61.198 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Accr13g01045 Pkinase 9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01045 K08838 - gmx:100815042 929.858