Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01042 ATGACCAGCAAAGAGATCCTCCATAAAATAAAGGAAAAAGTTGGATTGTCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGCAGATAAGTCATGGCTTTCACTTGGTAAAGGGAAAATCAGCTCATGCTATGGAAGATTATCTCGTTGCAAAATTTAAGCAAGTTGATGATCATGAATTGGGTTTGTTTGCAATATTTGATGGTCACATGGGTCACGACGTGGCTGACTACTTACAGTCCCATTTATTTGAAAATATCTTAAAAGAGCCTGACTTCTGGACAGAAACTGGAAAAGCTGTCAAGAGAGCATATCGTATAACTGATTCGACCATTCTTGAGAAGGCAGTTGAATTGGGATCAGGGGGCTCCACTGCAGTCACGGCAATATTGATTGATTGTCATAAGCTGGTAATAGCCAATGTTGGGGATTCAAGGGCTGTCCTATCCAGGAATGGTGTGGCCAAACAACTATCAGTGGATCATGAGCCGATTACCGAAAGAGAGAAGATTGAAGACAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTGCACGTGTGGATGGACAGCTGGCAGTGTCTCGGGCATTTGGTGACAAAACCTTGAAGAAACACCTTAGTTCAGAACCAGATGTAACTGAAGAGATTATAGATGAAGATGCAGAGTTTGTTATACTAGCCAGTGATGGATTGTGGAAGGTAATGACAAATCAAGAAGCAGTTGATACTATCAAGAATGTCAAGGATGCTCGGTCAGCGGCAAAGCTTCTTACTGAAGAGGCACTTCAGAGGAAGAGCTCAGATGATATCTCCTGTATTGTCTTGAAGTTTCAATGA 846 0.4196 MTSKEILHKIKEKVGLSDPDSGKGKSKMSKQISHGFHLVKGKSAHAMEDYLVAKFKQVDDHELGLFAIFDGHMGHDVADYLQSHLFENILKEPDFWTETGKAVKRAYRITDSTILEKAVELGSGGSTAVTAILIDCHKLVIANVGDSRAVLSRNGVAKQLSVDHEPITEREKIEDRGGFVSNFPGDVARVDGQLAVSRAFGDKTLKKHLSSEPDVTEEIIDEDAEFVILASDGLWKVMTNQEAVDTIKNVKDARSAAKLLTEEALQRKSSDDISCIVLKFQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01042 281 CDD PP2Cc 32 280 IPR001932 -
Accr13g01042 281 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Accr13g01042 281 SMART PP2C_SIG_2 38 280 IPR001932 -
Accr13g01042 281 Gene3D - 16 281 IPR036457 -
Accr13g01042 281 SMART PP2C_4 23 278 IPR001932 -
Accr13g01042 281 Pfam Protein phosphatase 2C 45 273 IPR001932 -
Accr13g01042 281 FunFam Probable protein phosphatase 2C 39 23 281 - -
Accr13g01042 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Accr13g01042 281 PANTHER PROTEIN PHOSPHATASE 28 279 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01042 Accr-Chr13 12668779 12672548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01042 1 281 PP2C-type Phosphatase Gene Family AT3G15260 74.740 1.38e-157 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01042 K17506 - jre:109013230 452.595