Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01033 ATGGAGTTTCAGAGACTTCAGTACTGTCTCTGTTTCATTCTGTTCAGTCTTCTCTATCATGGTTCTCAAGCGTATGTATTCTACGCTGGTGGAAGAGATGGTTGGGTTTTGAAGCCTTCAGAGGACTACAATCACTGGGCTGGAAGAAACAGATTTCTGGTCAATGACACTATAGTGTTTAAGTACAAGAAGGGGTCCAATTCGGTTTTGCTGGTGAACAAGGAGGGTTATGATAAATGCAATAAGACCAACCCCATCAAGAAATTTGAAGATGGTGATTCTGTGTTTAAGTTTGATCGATCAGGACCTGTATACTTTATCAGTGGGACTGGTGATTATTGTGAAAAGGGTCAGAAATTGATCGTTGTAGTTTTGGCCATAAGATCACCTCCTGACTATCCTCCTCCTCCTTCCTCTGTTTCTCAACCTCCGGTGGCTAATCAGCCGTCTCCGGCGGTTTCACCATACCCATCACCGAAGATATCTCCGTCATCGGCTCCAGCTCCTTCGGTTTCACCATATCCATCACCAATGATATCTCCGTCGTCGTCACCCTCTCCAGCTGTTTCCCCTGCACCGGCCAATGTCCCTTCTTACCCAACGCCGGCATCTGCACCTTCTCCGGCTCCGGCGAATACATCACCCACACCGTCCCCTGCCAATACTCCAGCTCATTCTCCAACGTCGCCATCGCCATCTCCTGAGACATCGACCCCTGCGTCATCACCGCCCTCACCAACGTCGCCATCGCCATCTCCTGCGACATCAACCCCTGCGTCATCACAGCCCTCACCTCCGGCGAGCACTCCGTCATCTGTTCCGGAGTCACCGGGAACACCTTCGGCGAGCCCCCCAGGATCGTCGAACCCGTCGTCGTCGAATGAAACATCGCCGCCTCCACCAAATGAATCAGGTGCATGGGACTTGGCTCCGTCAAGCTTATTGGTGTATGTGATCATCTTTGTGCTGAGTGCTGCTCTGAGTGGAACTTTGGGTGGACATTAG 1005 0.5104 MEFQRLQYCLCFILFSLLYHGSQAYVFYAGGRDGWVLKPSEDYNHWAGRNRFLVNDTIVFKYKKGSNSVLLVNKEGYDKCNKTNPIKKFEDGDSVFKFDRSGPVYFISGTGDYCEKGQKLIVVVLAIRSPPDYPPPPSSVSQPPVANQPSPAVSPYPSPKISPSSAPAPSVSPYPSPMISPSSSPSPAVSPAPANVPSYPTPASAPSPAPANTSPTPSPANTPAHSPTSPSPSPETSTPASSPPSPTSPSPSPATSTPASSQPSPPASTPSSVPESPGTPSASPPGSSNPSSSNETSPPPPNESGAWDLAPSSLLVYVIIFVLSAALSGTLGGH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01033 334 MobiDBLite consensus disorder prediction 134 308 - -
Accr13g01033 334 CDD OsENODL1_like 25 125 IPR041846 -
Accr13g01033 334 PANTHER BLUE COPPER PROTEIN 26 194 IPR039391 GO:0009055
Accr13g01033 334 PRINTS Proline rich extensin signature 129 141 - -
Accr13g01033 334 PRINTS Proline rich extensin signature 143 159 - -
Accr13g01033 334 PRINTS Proline rich extensin signature 204 220 - -
Accr13g01033 334 PRINTS Proline rich extensin signature 181 202 - -
Accr13g01033 334 PRINTS Proline rich extensin signature 166 178 - -
Accr13g01033 334 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055
Accr13g01033 334 MobiDBLite consensus disorder prediction 285 301 - -
Accr13g01033 334 MobiDBLite consensus disorder prediction 134 284 - -
Accr13g01033 334 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Accr13g01033 334 FunFam Early nodulin-like protein 1 24 129 - -
Accr13g01033 334 Gene3D - 23 128 IPR008972 -
Accr13g01033 334 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01033 Accr-Chr13 12444360 12445497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01033 9 227 Phytocyanin Superfamily AT5G53870 43.874 1.14e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01033 - - pcin:129314212 225.713