Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01019 ATGGGTGTTGCAGCTTCTTCTTCGTCTTCCAAGAAACATGAAGTGTTTCTGAGTTTCAGGGGAGAGGATACTCGCAGATCCTTCACCAGTTATCTCCATGAAGCCTTACGCCTCAAAGGTATTGAGGTTTTCATTGATGATGAGCTCCCAAAAGGGGACGACATCTCCCAATCACTCGTCCAAGCAATTCAAGATTCATCTCTGTCTGTGATTGTCTTCTCTAAAAACTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCATTGAGATCCTTCGCTGTAAAGAAGAGCAGGGACAGCTTGTTGTTCCTGTATTCTACAAAGTGGACCCATCACATGTACGCCATCAGAGGGGAGCTTATGAGGAAGCATTTGCACAACATTTGAAGAAAAACCCAGACAAGGTGGATGAGTGGAGAAAAGCCCTTTTTGAAACTGCAAGTTTAGCTGGATGGCACTCTTGTAATTACAGGAATGAAGCAGAACTCATTCAAAATATTGTCAGCGACATCATAAAAAAACTACACCATGGGTCCTCAAGTGCATTGGCGAATATTGTTGGAATTGACAAGAATTGTGATGCTATTATTGAATTTTTATTGAAAGATGTCTCAACCGTTGGAATTTGGGGCATGGGCGGGATAGGCAAAACAACCATGGCTAAGGCTGTGTTTGCCAAATTCCGCTCTCAATTTGACAGTTGTTGCTTCTTGGAAAATCTTAGAGAAGAGTCAAAAAAGCATGGTCTAAAATATATACGTGATAAACTTGTCAGTGAACTAACAAATGATAGGTATCTTGAAGGGCTTAGTCGTAGAAAAGTTTTGATTGTACTTGATGATGTCAATGACACAAGTCAATTAGATTATTTGGAAAATGAAGCTCCTCCTTTTAGACATGGTAGTAAAGTCATCATAACAAGTAGAGATAGACATGTACTTGAAGGAAGGGTTGATAGAATACATGAAGCCAAAGCATTGGGCCCTGACAATTCACTTGAGCTTTTCAACCTCAAAGCCTTCCGCAAAGACAGTTATGAAAGTGAATATAAAGAACTAGTTGAAAGAGCACTTGCTTATGCCCAAGGTGTTCCATTAGCCTTAATCGTGTTGGGTTCGTTTCTTCATTCCAGAACTATAGAACAATGGGAAAGTGCAATGAGCAAATTAGAAAGCAGGATCGATCCAAGTATTCTAAATGTGTTAAAATTAAGCTATGATGGACTTGATGATGAAGAGAAAGCGGTTTTTTTAGACATTGCTTGTTTTTTTAAGGGTGATTCTGAAGGATATGTATTGGCAATGCTAGAAAGCTTTGGCTTTCATGGATACATTAGTTTGAAAACCCTTATGGACAAGGCATTGATAAGTGTTGTTCATGGTACGGTACAGATGCCTAATCATGCTAAAGTATGGATGCATGATTTAATTCAATCAATGGCTTTTGAAATTGTTCGCCAAGAGTGTCTAACAAATCCTGAAAGACGTAGTCGACTATGGAATCCTGATGAGATCTATGATGTACTAAAATATAATCAGGGAAGTGATGCAATTCAAGGCATAAGTTTAAATATGTCTCAAATTAGAGATTTACAATTGAGCGCTGATACCTTCAAAAAGATGACTAATTTAAGGTTTCTTAAATTCTATTCATCTTGGGGTCAAAAATCGTGCATTGTGAATCTTCCTTCTGGGCTTGACTCATTTTCCAAGTCACTATGTTATCTTCAATGGGACAATTGTCCTTCACAATCTCTACCATTGTCATTATGTGCTGAGAAGATAGTCGAACTTCGAATGCCTAATAGCCACCTTAAAAAACTATGGGATGGCATGCAGAACTTGGTGAATTTAAGAAAAATAAATCTTGATGGATCCAAATATTTGATGGAGTTGCCTGATATATCAACGGCTCAAAATCTTGAAGAGCTTTATCTTATGAGGTGTGAAAGTTTAAGCCATCTTGATCCATCAATTTTATCTCTTCCAAAATTGCGTGTTGTCTCTCTACTTCAATGTAGAAGCCTAAAGAGTTTGAAAACTGAGCATCAGTCAAAATCTCTCGTAAATATAAACGTCATCGGATGCTCTAGGCTCGAGGAATTTTCATTCTCTTCAACCGAAATATATGGTTTATACTTAGATTATATAACTATTAAGATATTGGACTTTTCAATTGGGCGTATGGAGAAACTTGATGCATTCCGTCTTGACTGCTCAAAACTAAAGAATCTTCAAATTGATGACATGATTTGTTGCATGAGATCTCTTACGTGCCTCCATCTTCTTAATTGCGGTGGAATAGTTGACAAATCAAAGCTCCATACCTTATTTAATTCTTTGTTTTTTCTGCAATCAATTCATTTGTGTGGGGCATACAAATTAACTGAACTTCCACAAAATATCAAACATCTCTCAAGGCTATCATGTCTTTCCATAAGAAATTGTAAGAGCCTTCAATCTTTACCAGAGCTTCCTCCATCTATTCTAGAATTAACAGTCAGCGACTGCACATCATTAAAGACACTACAACTCACTTCTCACATTGAATCTTCAATGTCGACAGGTGAAATAATGTTGAGTTCAACGCTATATTCCTCAGTAAGTTGTCTCAGAAATCTTTTTAATCTTACTCTTGGTGGATGTGAACAATTGTATGAACTCCCTGAATCCATCGGCTCCTTATTCTCATTACAGTCATTGGATTTGAGAGGCAGTAATATAGAGAGCCTACCTGCTAGCATCAAGCATCTTTTAAGACTAAGCTTCATTAACTTGAGCAATTGTAGAAGGTTTCGTTCCCTGCCAGAACTGCCATTCTTCATCCAAAGAGTTGATGCTGATGGTTGCATATCGCTAGAGATTGTACCTACTTTAGCAATCACGCCACGTCTGTCGTCCATACACCTAAAAGATTGCTTGAAATTGGAGAATAGCTATATGGAAAGTGCCTGTTTACCATTGAAGCAAGCAATCTACAGAACTGGAGCATGTGAGTTTTGTTACCCAGGAAGAAAAGTTCCAGAGTGGTTTATATCTAATCAAGGAATAGATGCTTCCAACAAAATATCTATTAAGCTGCCTTCAACCACAACCGACCTAATTGGCTTCGTTCTCTGTTCTGTTCTTTCTCACCATGCTCATGGTTATGGTCACTTGCAATGCCAACTTTACTATGATGGTAAGAAGCACAAACGGTCACAATTTCACAAAGTGATGACAAATTTTGATTCACATCATGTTTTTCTATGGTGTGAATCTGACATGTTCATAAACTTCGGTAAAAGAATGGATGACCAAAACATCAATTACAGGCCAAACATGTCATTTAAATTCTCCGTTGTTACAGATAGGAAGAAGTTTGTTGATGGTGTAATTGAAGCATGTGGAGTTTGCCCAATATATGCCTCAGAGTATCCCAAATTCATTCAACAAATGGAATTGAAGGCAAACTTGGGTGCCCAAAAAGAGACTTGTCAAGATGCTGATGAGAATTCATTTCATGGAATACTAAAATATGCTAATTTCTCGTTGAAAACAGGAAAGTTTGGCAATCTTGAAGGAAGTGATATTCCGGAGTGGTTTGCTTACACAAGTTCGACGATAGATCATTTTGGCGGTTTACAAGCAAGCATTCAACTTGCTTCAGATTTTGACAAATTGATGGGTTTCATTTTCTGCTTTGTTATACCTAATTTCTCCTCAAAAGAAAGGGATCAATGTTACTCCAAGTATAGGGGTAATGGCACAGGTTTCATCGGTCCAAGTGGATGGCACCATTCAATGATAGAATTGAACTCAAATAATGTTTTTCTATGGTATGATCCCTTCTATAGTGAATACATACAACACTATCTCCGACAGGGAAAAGGTTGTGATGCCAATCTTAACCTTACATTTTCATTTAATCTTGGTTATGGTTTGCTCAAAGGATGGAGGGAACATATGATTGGTGATTGTTTGATCAAAGAATATGGAGTTCGTCCAATATATGTCTCAGAGTACACAAACTTTCTTCAACAAGAAAAACTGAAGGTAAGTAAGCGGATAAAGAGGCATCAAAATATTGAGGATGACCAACTCCCTTCAACAAAGAAATTGAAGGACTCTTCAATTTATCAATCTATTCCCATGATTTCTGAGTTCAAGATATCTCATGATGTTGATGAGTTGCTACTTCTGCTATCCCAATTGAATTTAGATTCTACAAAGAATCGCACTCATCAAAAATAA 4230 0.3759 MGVAASSSSSKKHEVFLSFRGEDTRRSFTSYLHEALRLKGIEVFIDDELPKGDDISQSLVQAIQDSSLSVIVFSKNYASSKWCLNELIEILRCKEEQGQLVVPVFYKVDPSHVRHQRGAYEEAFAQHLKKNPDKVDEWRKALFETASLAGWHSCNYRNEAELIQNIVSDIIKKLHHGSSSALANIVGIDKNCDAIIEFLLKDVSTVGIWGMGGIGKTTMAKAVFAKFRSQFDSCCFLENLREESKKHGLKYIRDKLVSELTNDRYLEGLSRRKVLIVLDDVNDTSQLDYLENEAPPFRHGSKVIITSRDRHVLEGRVDRIHEAKALGPDNSLELFNLKAFRKDSYESEYKELVERALAYAQGVPLALIVLGSFLHSRTIEQWESAMSKLESRIDPSILNVLKLSYDGLDDEEKAVFLDIACFFKGDSEGYVLAMLESFGFHGYISLKTLMDKALISVVHGTVQMPNHAKVWMHDLIQSMAFEIVRQECLTNPERRSRLWNPDEIYDVLKYNQGSDAIQGISLNMSQIRDLQLSADTFKKMTNLRFLKFYSSWGQKSCIVNLPSGLDSFSKSLCYLQWDNCPSQSLPLSLCAEKIVELRMPNSHLKKLWDGMQNLVNLRKINLDGSKYLMELPDISTAQNLEELYLMRCESLSHLDPSILSLPKLRVVSLLQCRSLKSLKTEHQSKSLVNINVIGCSRLEEFSFSSTEIYGLYLDYITIKILDFSIGRMEKLDAFRLDCSKLKNLQIDDMICCMRSLTCLHLLNCGGIVDKSKLHTLFNSLFFLQSIHLCGAYKLTELPQNIKHLSRLSCLSIRNCKSLQSLPELPPSILELTVSDCTSLKTLQLTSHIESSMSTGEIMLSSTLYSSVSCLRNLFNLTLGGCEQLYELPESIGSLFSLQSLDLRGSNIESLPASIKHLLRLSFINLSNCRRFRSLPELPFFIQRVDADGCISLEIVPTLAITPRLSSIHLKDCLKLENSYMESACLPLKQAIYRTGACEFCYPGRKVPEWFISNQGIDASNKISIKLPSTTTDLIGFVLCSVLSHHAHGYGHLQCQLYYDGKKHKRSQFHKVMTNFDSHHVFLWCESDMFINFGKRMDDQNINYRPNMSFKFSVVTDRKKFVDGVIEACGVCPIYASEYPKFIQQMELKANLGAQKETCQDADENSFHGILKYANFSLKTGKFGNLEGSDIPEWFAYTSSTIDHFGGLQASIQLASDFDKLMGFIFCFVIPNFSSKERDQCYSKYRGNGTGFIGPSGWHHSMIELNSNNVFLWYDPFYSEYIQHYLRQGKGCDANLNLTFSFNLGYGLLKGWREHMIGDCLIKEYGVRPIYVSEYTNFLQQEKLKVSKRIKRHQNIEDDQLPSTKKLKDSSIYQSIPMISEFKISHDVDELLLLLSQLNLDSTKNRTHQK 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01019 1409 Gene3D - 326 409 IPR042197 -
Accr13g01019 1409 PRINTS Disease resistance protein signature 268 282 - -
Accr13g01019 1409 PRINTS Disease resistance protein signature 802 818 - -
Accr13g01019 1409 PRINTS Disease resistance protein signature 360 374 - -
Accr13g01019 1409 PRINTS Disease resistance protein signature 205 220 - -
Accr13g01019 1409 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 176 - -
Accr13g01019 1409 Pfam NB-ARC domain 190 392 IPR002182 GO:0043531
Accr13g01019 1409 Pfam C-JID domain 1001 1137 IPR045344 -
Accr13g01019 1409 Gene3D Ribonuclease Inhibitor 509 689 IPR032675 -
Accr13g01019 1409 Gene3D Ribonuclease Inhibitor 690 852 IPR032675 -
Accr13g01019 1409 ProSiteProfiles TIR domain profile. 11 174 IPR000157 GO:0007165
Accr13g01019 1409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 419 IPR027417 -
Accr13g01019 1409 Pfam Leucine Rich Repeat 595 610 IPR011713 -
Accr13g01019 1409 Pfam TIR domain 12 180 IPR000157 GO:0007165
Accr13g01019 1409 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 151 IPR035897 -
Accr13g01019 1409 SUPERFAMILY L domain-like 471 981 - -
Accr13g01019 1409 Gene3D - 177 319 IPR027417 -
Accr13g01019 1409 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 702 IPR044974 GO:0006952
Accr13g01019 1409 Gene3D - 6 176 IPR035897 -
Accr13g01019 1409 SMART till_3 12 148 IPR000157 GO:0007165
Accr13g01019 1409 Gene3D Ribonuclease Inhibitor 853 1000 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01019 Accr-Chr13 12228070 12232852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01019 786 930 WRKY Transcription Factor Family AT4G12020 29.139 8.81e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01019 - - pcin:129289344 1219.91