Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01010 ATGTCAAAGTTTTTGGCACCTGAGAACACAAGAACAAGGACAGCCACCACAAAGTCTGATGTTTTCGCTTTCGGTGCTTTTATGCTGGAGGTTGTATGTGGAAGAAGGCCTGTAGACCTAGTAAGTGAAGATATGGTTTTGGTGGATTGGGTATATGGGTTATGGAAGAAGGGTGAGATTATTGAGGCAAAGGATCAGAATTTGGGAACGGAGTATAAAGCAGAGTTAGAATTAGTGCTGAAATTGGGACTTCTGTGTTCTAATTCAAAGGCTGGAGATAGGCCAAGCATGCGCCAAGTTGTGCAGTATTTGAATATGGAAGTGCCTTTGCCTGATTTCTCAACGTTAATATCGTCTCCTTCTTGCTCTGGATTTGTATTTGGGAGGCACCAAGACTTGGATGACATTGCAATGTCGCTTCCATCTTCAAGTGTGGATGGCTTTCACTCTCGTTATTCAATACCTGAATCGATCCTCTCAGGTGGTCGTTGA 492 0.4329 MSKFLAPENTRTRTATTKSDVFAFGAFMLEVVCGRRPVDLVSEDMVLVDWVYGLWKKGEIIEAKDQNLGTEYKAELELVLKLGLLCSNSKAGDRPSMRQVVQYLNMEVPLPDFSTLISSPSCSGFVFGRHQDLDDIAMSLPSSSVDGFHSRYSIPESILSGGR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01010 163 PANTHER - 4 109 - -
Accr13g01010 163 Pfam Protein tyrosine and serine/threonine kinase 3 104 IPR001245 GO:0004672|GO:0006468
Accr13g01010 163 Gene3D Transferase(Phosphotransferase) domain 1 2 109 - -
Accr13g01010 163 SUPERFAMILY Protein kinase-like (PK-like) 4 118 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01010 Accr-Chr13 12146626 12147117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01010 4 163 Receptor kinase-like Gene Family AT2G37710 53.659 2.36e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr13g01010 PK_Tyr_Ser-Thr 4.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01010 - - gmx:100802293 179.104