Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00976 ATGGATAAAGAGATGACGGACATTGAGGCTCCAACAACTAATGGAGCAGCTTCAGACATTTTGCAGAAGAGGAATCGTCCTGTTACTCTTAAGTTCGAGGACGTTGTGTGCAGAATCAAGAGCAAGAAACAAGGATTATCATCAATTTGGAAAAAGGGAAATAAAGAAGAAGAGAAAATAATCCTCAAGGGAGTGAGTGGCATTATTGAACCAGGTGAAGTTTTGGCCATGCTTGGTCCATCTGGGAGTGGCAAAACAACCCTACTAACGGCCTTGGGCGGCCGGCTCGGCAGCGGGAAGCTTCAAGGGACCATAACCTACAATGGCCAAAAGTTCTCCAACTCAATGAAGAGAAACACAGGCTTTGTAACCCAAGACGATGTTCTCTACCCTCACTTGACTGTAACAGAAACCCTAGTTTTCACGGCACTCCTCAGACTTCCCAATAGTTTCTCCAAACAAGAGAAGATTTTGCAGGCTGAGAGTGTTATAACACAATTAGGTTTAACCAATTGTAAAGATAGCATAATTGGGAACACTCTTTTGAGAGGTGTTTCTGGTGGGGAGAGGAAGAGGGTTAGCATTGGGCAAGAAATGCTTGTAAACCCTAGCTTGCTTTTCTTGGACGAGCCTACGTCTGGCCTCGACTCGACCACGGCTCAAAGGATCGTGTCGTGTTTGTGGGAGCTAGCAAATAAGGGAAAAACTGTTGTTATGACTATACACCAACCTTCTAGTAGGTTGTATTACATGTTTCACAAGGTTTTGTTACTATCTGAAGGAAGCTCAGTGTACTTTGGTAAAGGTTCTGAAGCCATAAAGTACTTTTCTAATGTTGGATTTTTCCCAGCTGTCGCCATGAACCCTGCAGATTTCCTCTTGGATCTTGCAAATGGTGTCTACTCAGATGAATCAACAGAAGATCATGGTTTAGTAAAGAGTAAATTGAAATCTGAATACACGAAACACATTGAGCCTCAATTGAAAGAAATGCTTCACTCAAGGGGAGACTCTGGTCAAAGTCATCAGCAAGACAATAAACACCATCAAGACACAGAATTTGGGAGATGGCCTACGACTTGGAGCCAGCAATTGTGTGTTTTACTTAGAAGAGGAGTCAAAGAGAGAAGACACGAATCCTTCTCTGCCCTCAGGATTTGTCAGATACTTATCGTCGCTATTATCTGTGGACTTTTGTGGTACAAGTCTGATATATCACACTTGCAGGATCAAGTGGGGCTTCTGTTCTTCATTGTAGGCTTCTGGGGTTTTGTACCTTTGTTCCATGCCATCTTCACCTTCCCACAAGAAATCATGATGCTTCAGAAAGAACGATCTTCAGGAACTTACAGGCTCTCTTCATACTTCATTTCAAGAATGGTAGGTGATCTTCCAATGGAGCTAGTTCTTCCCACAATCTTTCTTATCATAACCTATTGGATGGCAAGCTTAAAACCCAACTTGTTAAGCTTCTTTTTCACTCTCCTTAGCCTCTTGTTCACTGTCCTAGTCTCACAAGGCCTAGGCTTAGCCTTAGGTGCTTCTCTCATGGATCAGAAAACAGCAACAACACTTGGTTCTGTGATAATGCTTAGCTTCATGCTAGCTGCTGGGTTTTATGTTCAAAAGGTGCCAAAGTTTATAGCTTGGATTAAGTACTTGTCTATTAGTCATTACACTTTCAAGCTCTTTTTGGGGTCTCAGTATGGTGTTAGGGACACGTACCCTTGTTCTGAAGGGCATCAATGTTTGGTTGCGGATTTTCCTTCTATAAAGCAAATCGGGATTGGTTTGAAAGGAGAAATGTTGGCTGCTTTGGCTTTAGGGATAATGCTTGTAGGTTATAGACTTTTGGCTTATTTGGCTCTTATGAGGATTGGGGTCACAAAGAAACTGGGTTAG 1902 0.4253 MDKEMTDIEAPTTNGAASDILQKRNRPVTLKFEDVVCRIKSKKQGLSSIWKKGNKEEEKIILKGVSGIIEPGEVLAMLGPSGSGKTTLLTALGGRLGSGKLQGTITYNGQKFSNSMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSFSKQEKILQAESVITQLGLTNCKDSIIGNTLLRGVSGGERKRVSIGQEMLVNPSLLFLDEPTSGLDSTTAQRIVSCLWELANKGKTVVMTIHQPSSRLYYMFHKVLLLSEGSSVYFGKGSEAIKYFSNVGFFPAVAMNPADFLLDLANGVYSDESTEDHGLVKSKLKSEYTKHIEPQLKEMLHSRGDSGQSHQQDNKHHQDTEFGRWPTTWSQQLCVLLRRGVKERRHESFSALRICQILIVAIICGLLWYKSDISHLQDQVGLLFFIVGFWGFVPLFHAIFTFPQEIMMLQKERSSGTYRLSSYFISRMVGDLPMELVLPTIFLIITYWMASLKPNLLSFFFTLLSLLFTVLVSQGLGLALGASLMDQKTATTLGSVIMLSFMLAAGFYVQKVPKFIAWIKYLSISHYTFKLFLGSQYGVRDTYPCSEGHQCLVADFPSIKQIGIGLKGEMLAALALGIMLVGYRLLAYLALMRIGVTKKLG 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00976 633 SMART AAA_5 71 262 IPR003593 GO:0016887
Accr13g00976 633 FunFam ABC transporter G family member 22 49 279 - -
Accr13g00976 633 Pfam ABC transporter 62 213 IPR003439 GO:0005524
Accr13g00976 633 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 620 - -
Accr13g00976 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 278 IPR027417 -
Accr13g00976 633 MobiDBLite consensus disorder prediction 333 354 - -
Accr13g00976 633 Pfam ABC-2 type transporter 242 348 IPR043926 GO:0140359
Accr13g00976 633 Pfam ABC-2 type transporter 363 569 IPR013525 GO:0016020|GO:0140359
Accr13g00976 633 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524|GO:0016887
Accr13g00976 633 Gene3D - 47 279 IPR027417 -
Accr13g00976 633 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 285 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00976 Accr-Chr13 11716397 11719742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00976 61 274 Calmodulin-binding Proteins AT2G36910 22.768 9.82e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00976 K05681 - aew:130789625 834.328