Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00975 ATGGGATTTCCGGCGACCGACCCGCTTGCCCAACTGAGTTTGCCTCCGGGATTTCGGTTTTACCCGACCGACGAGGAGCTTCTGGTTCAATATCTATGCCGGAAAGTAGCCGGCCACCATTTCTCTCTGCAAATTATAGGCGAAATCGACTTGTACAAGTTCGACCCATGGGACCTACCAAGCAAGGCGATTTTCGGTGAGAAAGAATGGTACTTTTTCAGCCCGAGAGACCGGAAGTACCCGAATGGATCTCGACCCAACAGAGTTGCCGGGTCTGGATACTGGAAAGCCACCGGAACTGATAAGATCATTACCACCGAAGGCCGGAAGGTTGGCATAAAAAAATCTCTGGTTTTCTACGTAGGCAAAGCACCCAAAGGAACCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTCGACAATTCCAGAAAGAATGGCAGCTCCAAGCTTGATGATTGGGTTCTGTGTCGAATTTATAAGAAGAATTTGAGCGCCCAAAAGAATATGCTTTCGAGCGTTTCAAGCAAAGATTATAGTTACAGCAATGGGTCTTCTCCGTCCTCATCGTCGCACTTGGACGACATGCTGGAATCATTGCCGGAGATCGAGGACCAGAGCTTGACCCTGCCGCATATGAACTCGCTGAAGGCTCCACCGCAAGACGAGAAGCTCAATTTCCATAATCTTGGCGCCGGAAATCTTGTAGACTGGGCCAACCCGGCGATGCTGAACTCGGTACCCGACTTCGTTCCGGGAAGTCAGGGTCAGGGGATGGTGAATTATAACCCAGGAAATGACCTTTATGTCCCGTCCATCTCTCAGCTCTGCCACACGGCGTTGCCGGCACCGAAGGCGGAGAATCTTGGGAACTCAATGGAGGAGGATGTTCGGAGCGGAGAGAGAAGCCGGGTGGAGACTTCTGGCGGGTACTTTCAGGCGAATTCGAATGTGGGATTCTCGAACTCCATTGACCCGTATGGATTCAAATACCCGAGTCAGGCAATCGGGTTCCGATCTCAACCATAA 1029 0.5102 MGFPATDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFDPWDLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKSLVFYVGKAPKGTKTNWIMHEYRLLDNSRKNGSSKLDDWVLCRIYKKNLSAQKNMLSSVSSKDYSYSNGSSPSSSSHLDDMLESLPEIEDQSLTLPHMNSLKAPPQDEKLNFHNLGAGNLVDWANPAMLNSVPDFVPGSQGQGMVNYNPGNDLYVPSISQLCHTALPAPKAENLGNSMEEDVRSGERSRVETSGGYFQANSNVGFSNSIDPYGFKYPSQAIGFRSQP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00975 342 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Accr13g00975 342 MobiDBLite consensus disorder prediction 176 195 - -
Accr13g00975 342 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Accr13g00975 342 FunFam NAC domain-containing protein 72-like 23 167 - -
Accr13g00975 342 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Accr13g00975 342 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 205 - -
Accr13g00975 342 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00975 Accr-Chr13 11701795 11703018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00975 1 339 NAC Transcription Factor Family AT4G27410 56.022 1.75e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr13g00975 NAM 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00975 - - qsa:O6P43_000934 483.411