Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00974 ATGGATAGCACCGAATCGTCGACGGGTTCGCAGCAGCCGAACCTTCCGCCGGGTTTCCGGTTCCACCCGACCGACGAAGAGCTCGTCGTTCACTACCTTAAGAAGAAGGCATCCTCTGCTCCCCTCCCCGTTGCGATCATCGCCGAGGTCGATCTCTACAAGTTCGATCCGTGGGAACTCCCAGCTAAGGCAGCGTTTGGAGAGCAGGAATGGTACTTTTTTAGCCCGAGGGATAGGAAGTACCCGAACGGAGCTCGGCCAAACAGGGCAGCGACATCTGGGTATTGGAAGGCAACAGGAACTGATAAGCCAGTGGTGACATCTACCGGAAACCAGAAGGTTGGGGTGAAGAAAGCTTTGGTTTTTTATGGAGGGAAGCCTCCAAGAGGAATCAAAACCAACTGGATCATGCATGAATATAGGCTTGCTGATAATAAGCCTAACAATAAACCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTCCGGCTAGATGATTGGGTGCTGTGTCGAATATACAAGAAGAGCAACACGCACAGATCGCCTATGGATCACGACGATTCATCGATGGAAGATATGATTGGAGGGGTTCTTCCGTCCATCAACGTTGGACAGATGAACGCCAGATTCCATCTTTCTAAGATGTCTACAACCTACGGCGGCGATGGTGCTGCCGGAGGAGGATTGTTGTTGCTGGACACAAACAATGATCACAACTTACTGGAAGGGGTTGTTGCTGGTGCCAACAACAACAACAATGGAAGAATCAACACAGAGCTTCCTGGTTTGGTCCCTACTATGGCTTCTTCAAACCTTACTAGTTCTTCAAACCTTACTAGTTCTGTTACAACCCTACCTTCTAAACGAACACTCCCTTCTCTGTATTGGAGCCCCGACGAGGATTTCGCTGGAACCTCCTCGAAAAGATTGAACATGGACAATAATGAGAACGGCGGGTGCAGTGGCGGCGGCGGCGGGGTTACTACGGCTGCGGCTGCGGGAGCTAATTCTATTGCTTCTCTGCTAAACCAGCTTCCACAGACACCTTCAATGGTGGGATCTATAGGGGATGGAATGTTTCGGGGACAGTATCAGATTCCTGGAATGCATTGGTACGCTTAA 1125 0.5022 MDSTESSTGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVVTSTGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMDHDDSSMEDMIGGVLPSINVGQMNARFHLSKMSTTYGGDGAAGGGLLLLDTNNDHNLLEGVVAGANNNNNGRINTELPGLVPTMASSNLTSSSNLTSSVTTLPSKRTLPSLYWSPDEDFAGTSSKRLNMDNNENGGCSGGGGGVTTAAAAGANSIASLLNQLPQTPSMVGSIGDGMFRGQYQIPGMHWYA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00974 374 FunFam NAC transcription factor 56 24 181 - -
Accr13g00974 374 MobiDBLite consensus disorder prediction 1 20 - -
Accr13g00974 374 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Accr13g00974 374 MobiDBLite consensus disorder prediction 1 17 - -
Accr13g00974 374 PANTHER NAC TRANSCRIPTION FACTOR 56 15 194 - -
Accr13g00974 374 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Accr13g00974 374 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Accr13g00974 374 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00974 Accr-Chr13 11673223 11674944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00974 19 374 NAC Transcription Factor Family AT3G15510 53.022 1.85e-122 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr13g00974 NAM 4.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00974 - - gmx:100170710 499.59