Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00961 ATGGCAGCATCCACTTTCATGGCGGCCACAGCAAGCTCTAGCACTGTTCTTAAACCTTCCCCTTTCCTGGGTCAAACCAGAGCATCCAACTCCAACTCTCTCATAGATCTTGTCCCTCTCGGAAATGCCAAATATACCATGGGAAATGAGTTGTGGTATGGACCAGACCGAGTGAAATACTTGGGTCCCTTTTCAGCTCAAACCCCTTCATACCTCACTGGGGAATTCCCTGGAGATTATGGCTGGGACACTGCTGGTTTATCTGCTGACCCTGAAGCTTTTGCCAGAAACAGAGCTCTTGAGGTGATTCATGGGCGATGGGCGATGCTTGGAGCACTAGGTTGCATCACACCAGAAGTCCTACAAAAATGGTTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCAGGAGCCCAGATTTTCTCAGAAGGAGGCCTTGATTACTTGGGAAATCCCAACCTGGTTCACGCACAGAGCATTCTCGCCGTCCTTGGCTTTCAAGTTGTGCTCATGGGTCTGGTTGAAGGCTTCCGCATCAACGGCCTTCCCGGAGTCGGAGAAGGCAACGACCTCTACCCCGGCGGCCAGTACTTTGACCCTCTTGGCCTTGCTGACGACCCTGTCACCTTCGCTGAACTCAAGGTGAAGGAAATCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAAGGACCGTTGGAGAATCTGTTGGACCACCTTGATAACCCTGTGGCTAATAATGCTTGGGTCTATGCCACCAAGTTCGTGCCTGGCTCTTAA 813 0.5055 MAASTFMAATASSSTVLKPSPFLGQTRASNSNSLIDLVPLGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00961 270 Pfam Chlorophyll A-B binding protein 69 236 IPR022796 -
Accr13g00961 270 FunFam Chlorophyll a-b binding protein, chloroplastic 59 263 - -
Accr13g00961 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 13 269 IPR001344 GO:0009765|GO:0016020
Accr13g00961 270 Gene3D Chlorophyll a/b binding protein domain 59 263 - -
Accr13g00961 270 SUPERFAMILY Chlorophyll a-b binding protein 51 267 - -
Accr13g00961 270 ProSitePatterns PTS HPR domain serine phosphorylation site signature. 26 41 IPR002114 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00961 Accr-Chr13 11339418 11340927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00961 13 270 Chloroplast and Mitochondria Gene Families AT2G05070 69.288 3.76e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00961 K08914 - vvi:100260599 523.857