Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00959 ATGATGTTATCAGCATCGCCAACCTCACTAGCGAGAAGTTCGCTAGAGGTAATGCTTGAATCGCTCCAGCGGAGAGACGAAGAGAATAAGCCAAAGGACTTGCCGCCGGCATTGCCAGCTCGTCCGACCTCCAAAGCTCGGCTTCCCTCAGCGAGAAGGTCGTTGCCGAATAACTTCAAGGTTAATGGAGATCCTGGTGAGACGGAATGCCTTCCGAACGGATTTCATGATGCGAACGAAGAGACTAAGAGGAAAGATACAGTTGATTTGGGACACAAGAGAAACGGAAGCCTCGGGAGCAAGAAGTTGAAGAGGGATGTGGAATCGCCTTACGCCATCGCATCAGAAGAGAACCAGAGCGACCAATTATCATCAAAGAGTCGAGAATACAACTCGGATGATAACGTTACTTATTTCATCAAGAAGAAACTTCATGTTTGGTGTAGGCAACCAAATGGGCACTGGGGACTAGGGAAGGTACAATCAACTTCAAAAGAAGAAGCTTTTGTTTTACTCACAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGCTCCTACCTGCTAATCCAGATATTTTAAAAGGCGTCAATGATCTCATACAGCTGAGTTATCTGAATGAGCCATCAGTTCTTTACACTCTTCGTTTTAGATATTCTCAAGAAATGATCTATAGTAAAGCAGGACCTATTTTAATAGCATTCAATCCCTTTAAAGATGTCCAGATTTGTGGAAATGATCATGCCACAACTTATAGGCAGAGATGCATGACTGACCCACATGTTTATGCCGTGGCAAATGCAGCTTATAATGAGATGATGAGAGATACAGTAAATCAGTCCATCATCATAAGTGGTCAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATTGTTATGCAATATTTGGCTGCTCTGGGTGGTGGAAGCTGTGGCATAGAAAATAAAGCCCTTCAGACACATTTTATTCTAGAAGCTTTTGGGAATGCAAAAACACCTAGGCACAACAATTCTAGCAGATTTGGGAAGTTAATTGAGATTCATTTCACTGCAGCAGGGAAAATATGTGGAGCTAAAATTCAAACCTTCATGTTACAAAAGTCAAGAGTTGCTCAGCTGACCAGTGGTGAGAGGTCATATCACATCTTTTACCAACTGTGTGCTGGATCTTTATCTGATCTTAAAGAGAGGCTGAACCTTAGAGAGGCCAGCAAATATAAATATCTTAATCAGAGTGACTGTATGACAATAGATGGTGTTGATGATGCTAAAATGTTTAATAAGCTACTGAAAGCGCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAGCATTTATTTAAAATCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCATGTTGTGGTGGTGGATGATGAAGCTGTCACCATTGCAGCCATGCTGATGGGTTGCAGTTCCCAAGAGTTAATAGTAACTTTATCTACTAGTAAAGTCCAAGCTGGCAAGGATTCTATTGCTAAAAGTTTGACATTGAAGCAGGCAATTGAAACAAGAGATGCACTGGCTCAATTTATGTATGCAAGTGTGTTTGAGTGGCTCATAAAAAAAATTAATAAGTCACTTGGATCTGGCAAACGGCGTACCGGGAGATCCATAAATATCTTTGATATTTGTGGATTTGAGTCATTCAAGAAAAACAGCTTTGAACAATTTTGTGTGAATTATGCTAACGAGAGGCTTCAACAACATTTCAATCGGCATATATTTAAACTTGAGCAGGAGAACTATGAAATGGATGGTGTTCATTGGACTGAAGTAGATTTTGCGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCATCAGGGATACTTTCTTTGTTGGAAGAGGAATCAAATTTGCCCAAGGCCACTGATCTCACGTTTGCCAACAAACTTAAACAACACCTGAATGCTAATCCTTTCTTTAAAGGAGAAAGAGGGAGGGCTTTTGGCGTTCGTCACTTTGCAGGAGAGGTTTTGTATGATACAAACGGCTTTCTACAGCAGAACAAAGATCTGCTGCCTTCTGAATACATACAACTCCTGGCATCATGTAGCTGTCAACTGCAGCAGTTGTTCTCGAAAATGCTTAGCCAAACACAGAAACAACTGAATTCGTTACAAATAGGTGCATTAGACTTGCAGCAGAGTGTGTGTGCAAAGCTCAAGGGTCAATTGTTTGGATTAATGCACCAATTGGAGAACACCTCACCTCATTTTATTCACTGCATACGGCCAAACACTAAGCAGCTTCCTGGCGTATTTGATGAAGATCTTGTCATGCAACAACTCCGTTGCTGTGGAGTCTTGGAGGCTGTTAGACTTTCAAGGATTGGATATCCTATCCAAATGACACATCAAGAGTTTGCTGAAAGGTATGGGTTTTTGCTTTCGGAGCCCAATGTATTTCATGATCCACTGAGCATCTCAGTTGCTGTATTGCGACAATTTAATACCCCTCCTGAAATGTATCAGTTTGGCTACACCAAAGTGCATTTGCGAAAAGGGCAGATTGGTGCATTGGAGGATAGAAGAAAACAGGTTATGCAAGGAATACTTCAGGTTCAAAAATGGTTCCGTGGTCATAAAGCCCGTCAATATTTCCGCGAACTTAAGAATGGAGTGACGAAGTTGCAATCATTTGCTCATGGAGAAATTTTGAGGACGAAATATGGTATCGTTGAAAAGTCTTCTATGACTATTGATTGTAAAAATTTTGAGGATATTGAGGCAATCATACTACTACAGTCAGTAATTCGTGGGTGGCTGGCTAGGAGGAGGAATGCTAATGGTTTGAATAAGGTGAAGAAACACCCTAATAACGAAAAACTTCAGCGATATTCTCGTGTGAAGATGCCAGATATGAAGGAAGCGACCAGAGAGCAGGTTCAGAATTTGCCTTCAGCCCTAGACCAACTCCGAAGGCGGGTGCTTAAGGCTGAGGCAACTCTTGAACAAAAGGAAGAGGAAAATACTGCTTTGAGGGAGCAGCTGAGACAAAACGAAGCAAAATGGATTGAATATGAGGCGAAGATGAAATCAATGGAGGAGACATGGCAAAAACAGATGGCATCTTTGCAAGTGAGTCTTGCAGCTGCTAGAAAGAGCCTTGCTTCTGACAACAACACTGCTTATCCTGGTAGACAAGAAGCTGTGTCACCTCGTTACAATGATTCTGAAGATTTTAATTCTGTATTGTCTAGAACTCCTGGCGGGAGCACACCTATCAAGTTTTCTAGCTCTCTCTCCGTCTCTGATTCTGGAGCGGTGGGAAGAGAAGTTAATGGTACCCTATCTGCAGTCAGCAATCTGATGAGGGAATTTGAACAGAGAAGACAGACTTTTGATTGCGATGCCAGGGCTCTGCTTGATGCCAAGGCCGGGCAGTCTGTCATGAATCCGGATGAAGAATTTAGGAAACTTAAACATAGGTTTGAGGGATGGAAGAAAGAATACAAGTATAGATTACGGGAGACAAAAGCAAGACTTCATAAAGTAGGGAATTCAGAAGGGGAAAAGAGCCGTCGGAGATGGTGGGGGAAGTTAAGCTCAAGAGCTTCATAG 3615 0.418 MMLSASPTSLARSSLEVMLESLQRRDEENKPKDLPPALPARPTSKARLPSARRSLPNNFKVNGDPGETECLPNGFHDANEETKRKDTVDLGHKRNGSLGSKKLKRDVESPYAIASEENQSDQLSSKSREYNSDDNVTYFIKKKLHVWCRQPNGHWGLGKVQSTSKEEAFVLLTNGNVMKVARSELLPANPDILKGVNDLIQLSYLNEPSVLYTLRFRYSQEMIYSKAGPILIAFNPFKDVQICGNDHATTYRQRCMTDPHVYAVANAAYNEMMRDTVNQSIIISGQSGSGKTETAKIVMQYLAALGGGSCGIENKALQTHFILEAFGNAKTPRHNNSSRFGKLIEIHFTAAGKICGAKIQTFMLQKSRVAQLTSGERSYHIFYQLCAGSLSDLKERLNLREASKYKYLNQSDCMTIDGVDDAKMFNKLLKALDVVQICKEDQEHLFKILAAILWLGNVSFQISDNENHVVVVDDEAVTIAAMLMGCSSQELIVTLSTSKVQAGKDSIAKSLTLKQAIETRDALAQFMYASVFEWLIKKINKSLGSGKRRTGRSINIFDICGFESFKKNSFEQFCVNYANERLQQHFNRHIFKLEQENYEMDGVHWTEVDFADNQGCLDLFEKKPSGILSLLEEESNLPKATDLTFANKLKQHLNANPFFKGERGRAFGVRHFAGEVLYDTNGFLQQNKDLLPSEYIQLLASCSCQLQQLFSKMLSQTQKQLNSLQIGALDLQQSVCAKLKGQLFGLMHQLENTSPHFIHCIRPNTKQLPGVFDEDLVMQQLRCCGVLEAVRLSRIGYPIQMTHQEFAERYGFLLSEPNVFHDPLSISVAVLRQFNTPPEMYQFGYTKVHLRKGQIGALEDRRKQVMQGILQVQKWFRGHKARQYFRELKNGVTKLQSFAHGEILRTKYGIVEKSSMTIDCKNFEDIEAIILLQSVIRGWLARRRNANGLNKVKKHPNNEKLQRYSRVKMPDMKEATREQVQNLPSALDQLRRRVLKAEATLEQKEEENTALREQLRQNEAKWIEYEAKMKSMEETWQKQMASLQVSLAAARKSLASDNNTAYPGRQEAVSPRYNDSEDFNSVLSRTPGGSTPIKFSSSLSVSDSGAVGREVNGTLSAVSNLMREFEQRRQTFDCDARALLDAKAGQSVMNPDEEFRKLKHRFEGWKKEYKYRLRETKARLHKVGNSEGEKSRRRWWGKLSSRAS 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00959 1204 MobiDBLite consensus disorder prediction 1057 1077 - -
Accr13g00959 1204 Gene3D - 377 436 - -
Accr13g00959 1204 SMART MYSc_2a 188 864 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 ProSiteProfiles IQ motif profile. 866 894 IPR000048 GO:0005515
Accr13g00959 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 945 IPR027417 -
Accr13g00959 1204 Gene3D Kinesin motor domain 198 791 IPR036961 -
Accr13g00959 1204 MobiDBLite consensus disorder prediction 20 106 - -
Accr13g00959 1204 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 141 190 IPR004009 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 MobiDBLite consensus disorder prediction 1181 1204 - -
Accr13g00959 1204 ProSiteProfiles IQ motif profile. 927 954 IPR000048 GO:0005515
Accr13g00959 1204 Gene3D Myosin VI head, motor domain, U50 subdomain 438 722 - -
Accr13g00959 1204 MobiDBLite consensus disorder prediction 1181 1196 - -
Accr13g00959 1204 Pfam IQ calmodulin-binding motif 927 944 IPR000048 GO:0005515
Accr13g00959 1204 Pfam IQ calmodulin-binding motif 869 886 IPR000048 GO:0005515
Accr13g00959 1204 Gene3D - 867 951 - -
Accr13g00959 1204 PRINTS Myosin heavy chain signature 278 303 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 PRINTS Myosin heavy chain signature 553 581 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 PRINTS Myosin heavy chain signature 606 634 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 PRINTS Myosin heavy chain signature 321 348 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 PRINTS Myosin heavy chain signature 224 243 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 Gene3D - 563 753 - -
Accr13g00959 1204 FunFam Myosin heavy chain 377 433 - -
Accr13g00959 1204 ProSiteProfiles Myosin motor domain profile. 194 863 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 PANTHER MYOSIN 187 1196 - -
Accr13g00959 1204 Pfam Myosin head (motor domain) 196 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr13g00959 1204 Coils Coil 987 1021 - -
Accr13g00959 1204 Gene3D - 796 864 - -
Accr13g00959 1204 SMART iq_5 864 886 IPR000048 GO:0005515
Accr13g00959 1204 SMART iq_5 924 946 IPR000048 GO:0005515
Accr13g00959 1204 SMART iq_5 887 909 IPR000048 GO:0005515
Accr13g00959 1204 CDD MYSc_Myo8 208 851 IPR036022 -
Accr13g00959 1204 MobiDBLite consensus disorder prediction 74 106 - -
Accr13g00959 1204 MobiDBLite consensus disorder prediction 20 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00959 Accr-Chr13 11325976 11338313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00959 1 1198 Myosins gene family AT5G54280 59.821 0.0 1451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00959 K10357 - gmx:100819335 1651.34