Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00944 ATGCTGGAGCTATTCCTGTGGATGCAATTTGCTCTGGCTTCTCTTCTAGTCATGGCCATCGGTAATGAATCATCATCTTCCTTATCCATACCTGTTGATAGTTTCTTGCTCGCTTGCGGCTCTTCAGTTAACATAACCTTTCAGGGTCGAACTTTTTTCCCCGAATCTGTCTATGAGAAACATAGATTAGAATTGAAAACCCAGAAATCTATTGCTGTTACCTCTGATTCTGGCGTGCCAGCTCCAATCTACCAGTCAGCTAGAGTCTTTTGGAGCAATGCTTCATATATATTCAGAATTGCAAGACCAGGTCACCATTGGATCCGCCTTTACTTCTCCCCTTTGCCCAACTTTCACCAGAACATGTCCTATGCCTCAATAACAGTCATCACTGAAGGTCTTGTGCTTCTCAGTGATTTCACTTTCATCAACTATGGTGGTTCTTACCTTTTCAAGGAGTATGCAATCAATGTTACATCTCCCACCTTGTCTCTAACATTCATCCCTTCCAGAAATTCATTTATTTTTGTTAACGCTGTCGAAGTTGTCTCCAAACCTAATGATACCTTTACTGATGCAATCTCTATGACATCAGTTCACATGGAGCATCATTCAGACCTGGCCCTTGAAACTGTTTACCGGTTGGATGTGGGCAATGAATCTCACACCAATAGGAATGATGACCTTGGTCGAAACTGGGAAGGTGATGAAAAATACATGGCCTCCAATAGTAGAGCACTAAACATTTCAGTTGATACTTCCTCTATAAATTTTGCTACTCAGAACGAACCTGGCATGGCACCAATATGGGTTTATGCTACAGCCAAAGCCATGGCAGATGAAACAAGACCCAATTTAACTTGGGTCTTCTCCGTAAATCCAAACTATACCTATTTTGTTCGGGTGCATTTTTGTGATACCATAAGCAACTCAATAAGTCTTGCAATTTTCAATCTATTTATAAATGATCGTGTTGCTTATGAAAGAGTCGACCTTTACACCATACTGCATAACTTTTCTGTCCCATATTACAAGGATTTTATTGTTTACACAAGAGAACATGACTTGATGGTAACTGTTGCTCCAGATAGAACAACAAATCGCAGAAATGCAACCATAAGTGGCCTGGAGATAATGAAGATCATCAATGAAGTCAGAATTCTGGATGAAGTGACTTCAGCTGATAGAAATCTCCCCAATTCTTCCTCAACAATCGTGAAATTAGCAATAATAGTTGGGCCTATCATTGGAGCTGCAGCTTTCCTAGTTCTCACTACAATAACATTCTGTTACATGATAGCTCACAGGTCCAAGGCAAGCTCTAGATCTACTACACCAACATCATGCAGGCTATTCACTTTACAAGAAATCAGTGAAGCAACAAACAACTTTGATGAGTGTTTGGTTCTTGGAGAAGGTGGTTTTGGCAAGGTCTACGAAGGAACGATGGATAATGGGATAAAAGTAGCCATCAAAGTAGCCAATCCCAAATCAAGACAGGGTCTTGGTGAATTTCAAAATGAGATTCAATTACTATCCAAGCTCTCTCATAAGAACCTTATCTCTCTAATAGGCTGTTGCGATGAAAACTCACAAATGATTCTAGTGTACGAATTCTTGGCAAATGGATCTTTAAGTGGCCACCTCTATGGAACCGCCTTTGTTCCTCTTTCATGGAAGCAACGGCTACTAATATGCATTGGGGCTGCAAAGGGTCTTCATTTCCTTCACACAGGGGCTCCTCAATGTATAATCCATCGTGATGTTAAGACGGCAAATATTCTCTTGGACAAGAATCTAGTTCCAAAAGTTGCTGATTTTGGAATCTCAAGAAAAGGTCCACCTCTTGATAAGAGCCATGTAACAACCCTTGTCAAGGGCAGCTTTGGTTATCTTGATCCAGAATATTTCAGAACAAAATATCTCACAGCGAAATCAGATGTGTTCTCATTTGGGATGGTTCTGATGGAAGTTATCAGTGGCAAGCCTGCTTTAGACAACACTCGACCTACAGAGCATATTAATTTGGCAACATGGGCATCAAGCTGCCAAGAAAAGGGCACCTTTCATGAGATCATAGACTCAAATTTGATTGGGAAAGTGAACTTAGATTCTCTAAACAAGGTACGTGAGTTAGCTTGGAAGTGCTTGGAGGAGCATCGCAAAAACAGACCACCAATGGTGTATGTACTGTGTGAGCTCGAAGACGCCCTCCACCTTGAGCTGGCTTCACCAATTTGGCAAGTTTCTGTGGATTGTGCCCTTGATGTGGTTGCAGAAAATGGAATTGAGGAAGAAAGGGAACAAGATGTTGCTTGA 2319 0.4118 MLELFLWMQFALASLLVMAIGNESSSSLSIPVDSFLLACGSSVNITFQGRTFFPESVYEKHRLELKTQKSIAVTSDSGVPAPIYQSARVFWSNASYIFRIARPGHHWIRLYFSPLPNFHQNMSYASITVITEGLVLLSDFTFINYGGSYLFKEYAINVTSPTLSLTFIPSRNSFIFVNAVEVVSKPNDTFTDAISMTSVHMEHHSDLALETVYRLDVGNESHTNRNDDLGRNWEGDEKYMASNSRALNISVDTSSINFATQNEPGMAPIWVYATAKAMADETRPNLTWVFSVNPNYTYFVRVHFCDTISNSISLAIFNLFINDRVAYERVDLYTILHNFSVPYYKDFIVYTREHDLMVTVAPDRTTNRRNATISGLEIMKIINEVRILDEVTSADRNLPNSSSTIVKLAIIVGPIIGAAAFLVLTTITFCYMIAHRSKASSRSTTPTSCRLFTLQEISEATNNFDECLVLGEGGFGKVYEGTMDNGIKVAIKVANPKSRQGLGEFQNEIQLLSKLSHKNLISLIGCCDENSQMILVYEFLANGSLSGHLYGTAFVPLSWKQRLLICIGAAKGLHFLHTGAPQCIIHRDVKTANILLDKNLVPKVADFGISRKGPPLDKSHVTTLVKGSFGYLDPEYFRTKYLTAKSDVFSFGMVLMEVISGKPALDNTRPTEHINLATWASSCQEKGTFHEIIDSNLIGKVNLDSLNKVRELAWKCLEEHRKNRPPMVYVLCELEDALHLELASPIWQVSVDCALDVVAENGIEEEREQDVA 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00944 772 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Accr13g00944 772 FunFam receptor-like protein kinase FERONIA 430 539 - -
Accr13g00944 772 Pfam Malectin-like domain 62 381 IPR024788 -
Accr13g00944 772 FunFam Interleukin-1 receptor-associated kinase 540 740 - -
Accr13g00944 772 Gene3D Transferase(Phosphotransferase) domain 1 540 744 - -
Accr13g00944 772 CDD STKc_IRAK 470 735 - -
Accr13g00944 772 Gene3D Phosphorylase Kinase; domain 1 427 539 - -
Accr13g00944 772 FunFam Putative receptor-like protein kinase 34 186 - -
Accr13g00944 772 Pfam Protein tyrosine and serine/threonine kinase 469 731 IPR001245 GO:0004672|GO:0006468
Accr13g00944 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Accr13g00944 772 SMART serkin_6 464 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00944 772 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 230 736 - -
Accr13g00944 772 ProSiteProfiles Protein kinase domain profile. 464 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00944 772 Gene3D - 207 382 - -
Accr13g00944 772 Gene3D - 34 188 - -
Accr13g00944 772 SUPERFAMILY Protein kinase-like (PK-like) 439 734 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00944 Accr-Chr13 11167367 11169685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00944 17 743 Receptor kinase-like Gene Family AT2G21480 40.832 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Accr13g00944 Malectin_like 1.3e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00944 - - pcin:129313301 1073.15