Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00943 ATGAAGCAGCAGATATCTATGCGCATGCTGGAGCTATTCCTGTGGATGCAATTTGCTCTGGCTTCTCTTCTAGTCATGGCCATCGGTAATGAATCATCATCTTCCTTATCCATACCTGTTGATAGTTTCTTGCTCGCTTGCGGCTCTTCAGTTAACATAACCTTTCAGGGTCGAACTTTTTTCCCCGAATCTGTCTATGAGAAACATAGATTAGAATTGAAAACCCAGAAATCTATTGCTGTTACCTCTGATTCTGGCGTGCCAGCTCCAATCTACCAGTCAGCTAGAGTCTTTTGGAGCAATGCTTCATATATATTCAGAATTGCAAGACCAGGTCACCATTGGATCCGCCTTTACTTCTCCCCTTTGCCCAACTTTCACCAGAACATGTCCTATGCCTCAATAACAGTCATCACTGAAGGTCTTGTGCTTCTCAGTGATTTCACTTTCATCAACTATGGTGGTTCTTACCTTTTCAAGGAGTATGCAATCAATGTTACATCTCCCACCTTGTCTCTAACATTCATCCCTTCCAGAAATTCATTTATTTTTGTTAACGCTGTCGAAGTTGTCTCCAAACCTAATGATACCTTTACTGATGCAATCTCTATGACATCAGTTCACATGGAGCATCATTCAGACCTGGCCCTTGAAACTGTTTACCGGTTGGATGTGGGCAATGAATCTCACACCAATAGGAATGATGACCTTGGTCGAAACTGGGAAGGTGATGAAAAATACATGGCCTCCAATAGTAGAGCACTAAACATTTCAGTTGATACTTCCTCTATAAATTTTGCTACTCAGAACGAACCTGGCATGGCACCAATATGGGTTTATGCTACAGCCAAAGCCATGGCAGATGAAACAAGACCCAATTTAACTTGGGTCTTCTCCGTAAATCCAAACTATACCTATTTTGTTCGGGTGCATTTTTGTGATACCATAAGCAACTCAATAAGTCTTGCAATTTTCAATCTATTTATAAATGATCGTGTTGCTTATGAAAGAGTCGACCTTTACACCATACTGCATAACTTTTCTGTCCCATATTACAAGGATTTTATTGTTTACACAAGAGAACATGACTTGATGGTAACTGTTGCTCCAGATAGAACAACAAATCGCAGAAATGCAACCATAAGTGGCCTGGAGATAATGAAGATCATCAATGAAGTCAGAATTCTGGATGAAGTGACTTCAGCTGATAGAAATCTCCCCAATTCTTCCTCAACAATCGTGAAATTAGCAATAATAGTTGGGCCTATCATTGGAGCTGCAGCTTTCCTAGTTCTCACTACAATAACATTCTGTTACATGATAGCTCACAGGTCCAAGGCAAGCTCTAGATCTACTACACCAACATCATGCAGGCTATTCACTTTACAAGAAATCAGTGAAGCAACAAACAACTTTGATGAGTGTTTGGTTCTTGGAGAAGGTGGTTTTGGCAAGGTCTACGAAGGAACGATGGATAATGGGATAAAAGTAGCCATCAAAGTAGCCAATCCCAAATCAAGACAGGGTCTTGGTGAATTTCAAAATGAGATTCAATTACTATCCAAGCTCTCTCATAAGAACCTTATCTCTCTAATAGGCTGTTGCGATGAAAACTCACAAATGATTCTAGTGTACGAATTCTTGGCAAATGGATCTTTAAGTGGCCACCTCTATGGAACCGCCTTTGTTCCTCTTTCATGGAAGCAACGGCTACTAATATGCATTGGGGCTGCAAAGGGTCTTCATTTCCTTCACACAGGGGCTCCTCAATGTATAATCCATCGTGATGTTAAGACGGCAAATATTCTCTTGGACAAGAATCTAGTTCCAAAAGTTGCTGATTTTGGAATCTCAAGAAAAGGTCCACCTCTTGATAAGAGCCATGTAACAACCCTTGTCAAGGGCAGCTTTGGTTATCTTGATCCAGAATATTTCAGAACAAAATATCTCACAGCGAAATCAGATGTGTTCTCATTTGGGATGGTTCTGATGGAAGTTATCAGTGGCAAGCCTGCTTTAGACAACACTCGACCTACAGAGCATATTAATTTGGCAACATGGGCATCAAGCTGCCAAGAAAAGGGCACCTTTCATGAGATCATAGACTCAAATTTGATTGGGAAAGTGAACTTAGATTCTCTAAACAAGGTACGTGAGTTAGCTTGGAAGTGCTTGGAGGAGCATCGCAAAAACAGACCACCAATGGTGTATGTACTGTGTGAGCTCGAAGACGCCCTCCACCTTGAGCTGGCTTCACCAATTTGGCAAGTTTCTGTGGATTGTGCCCTTGATGTGGTTGCAGAAAATGGAATTGAGGAAGAAAGGGAACAAGATGTTGCTTGA 2343 0.4123 MKQQISMRMLELFLWMQFALASLLVMAIGNESSSSLSIPVDSFLLACGSSVNITFQGRTFFPESVYEKHRLELKTQKSIAVTSDSGVPAPIYQSARVFWSNASYIFRIARPGHHWIRLYFSPLPNFHQNMSYASITVITEGLVLLSDFTFINYGGSYLFKEYAINVTSPTLSLTFIPSRNSFIFVNAVEVVSKPNDTFTDAISMTSVHMEHHSDLALETVYRLDVGNESHTNRNDDLGRNWEGDEKYMASNSRALNISVDTSSINFATQNEPGMAPIWVYATAKAMADETRPNLTWVFSVNPNYTYFVRVHFCDTISNSISLAIFNLFINDRVAYERVDLYTILHNFSVPYYKDFIVYTREHDLMVTVAPDRTTNRRNATISGLEIMKIINEVRILDEVTSADRNLPNSSSTIVKLAIIVGPIIGAAAFLVLTTITFCYMIAHRSKASSRSTTPTSCRLFTLQEISEATNNFDECLVLGEGGFGKVYEGTMDNGIKVAIKVANPKSRQGLGEFQNEIQLLSKLSHKNLISLIGCCDENSQMILVYEFLANGSLSGHLYGTAFVPLSWKQRLLICIGAAKGLHFLHTGAPQCIIHRDVKTANILLDKNLVPKVADFGISRKGPPLDKSHVTTLVKGSFGYLDPEYFRTKYLTAKSDVFSFGMVLMEVISGKPALDNTRPTEHINLATWASSCQEKGTFHEIIDSNLIGKVNLDSLNKVRELAWKCLEEHRKNRPPMVYVLCELEDALHLELASPIWQVSVDCALDVVAENGIEEEREQDVA 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00943 780 Gene3D Phosphorylase Kinase; domain 1 435 547 - -
Accr13g00943 780 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 238 744 - -
Accr13g00943 780 FunFam receptor-like protein kinase FERONIA 438 547 - -
Accr13g00943 780 ProSitePatterns Protein kinases ATP-binding region signature. 478 500 IPR017441 GO:0005524
Accr13g00943 780 ProSiteProfiles Protein kinase domain profile. 472 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00943 780 Pfam Malectin-like domain 70 389 IPR024788 -
Accr13g00943 780 SUPERFAMILY Protein kinase-like (PK-like) 447 742 IPR011009 -
Accr13g00943 780 Gene3D - 42 196 - -
Accr13g00943 780 Gene3D - 215 390 - -
Accr13g00943 780 FunFam Putative receptor-like protein kinase 42 194 - -
Accr13g00943 780 Gene3D Transferase(Phosphotransferase) domain 1 548 752 - -
Accr13g00943 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Accr13g00943 780 CDD STKc_IRAK 478 743 - -
Accr13g00943 780 SMART serkin_6 472 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00943 780 Pfam Protein tyrosine and serine/threonine kinase 477 739 IPR001245 GO:0004672|GO:0006468
Accr13g00943 780 FunFam Interleukin-1 receptor-associated kinase 548 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00943 Accr-Chr13 11167343 11169685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00943 25 751 Receptor kinase-like Gene Family AT2G21480 40.832 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Accr13g00943 Malectin_like 1.3e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00943 - - pcin:129313301 1074.31