Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00941 ATGAAAATAGTGAAGTGGGTTTCTTTTGTTTTGGCAATGTTTTCATTCTTGGTGGATGAGTCATTTGCCTCATACACCCCTCCTGATAATTATCTGATTGCTTGTGGTTCATCTCAAAATATCACTTTCCAAGGTCGCACTTTTGTACCTGATTCACAACACTCTTCGTTAGTATTGGAAACTGGGAATTCTATTGTTGCTGCTAATTCTAGTTCTCGTGTCCCATTCCCAATATACCAATCAGCTCGGATTTTCACCGAGAAAGCTTCTTATAACTTTGAAATCCAGCAACAAGGCCGTCACTGGGTTCGCCTGTACTTCTTCCCTGTTAAAAACCCCAGCCATGACTTGACTTCTGCCTCTTTAACTGTGGTCACTGATGAATTTGTTCTCCTAAATAACTTCACCTTTAAGAACTACAATGGTTCTTACATGTTCAAGGAGTATGCGATCAATGTTACATCTGATACGTTGACTCTTACCTTAATTCCTTCAAATGGTTCAGTGGTTTTTGTCAATGGTATTGAAGTTGTATCAATGCCAAATGACTTGTTTATTGATCAGGCATTGGCTTTAATTCCATCAGAACCATTCAGTGGCCTTTCTGTTCTCGCCTTTGAAACCGTTTACCGGTTGAACATGGGAGGTCCTCTGCTTAATGCTCAAAATGACACCCTTGGAAGGACTTGGGAGAATGATCTGAAGTACCTTCATGTGAATAGTTCTGTCCTTAATGTTTCAGTTAGCCCTTCAACTATCAAGTATCCAGCCGGTGTTTCACCTGAGACAGCACCAAATTGGGTTTATGCCACTGCAGAAACTATGGGTGATGCAAATGTGGCTCAAAATAGTTTCAACGTTACTTGGGTTTTCCCTGTGGATCCCAACTTCTCTTATTTAATTAGGGCACACTTTTGTGATATTATGAGCATATCCCTCAATAGTTTAGTGTTTGATATGTTCGTGAATTCTGATATAGCTCTTCGAAGTCTTGACCTCTCATCCATAACTGGTAACTTGGCTGTGCCTTACTACAGGGACTTCGTTTCTAATGCGTCCACAGATTCAAACACTTTGAGTGTAAGTGTTGGTCCAGATTCAGTGGCAGATATTACAAATGCCACCATGAATGGACTGGAGATAATGAAAATTAGCAATTCATTGAAGAGCTTGGATGGGCTTTCTTCAGTGGAGAGTCTTCTTCCTAGTTCATCCTCAAAGGCGAACAAGATAGGAATAATAGTTGGTTCTTCTGTGGGTGCAGTAGCTGCTATAGCATTGGTTGGTTTGTGTTACTATTGCTGCATTGTAAGACGCCAGTCAAAGTCCCCTCAACAAGGTCATTCATGGCTGCCTTTGCCCTTGTATGGAAACTCTCAGACACTGACAAAGTCAACATTATCACAGAAGAGCGGAACTGCGAGTTGCATTTCTATAGCTTCGACGAATCTTGGACGTTTCTTCAGTTTCCAAGAGATCCTAGATGCAACCAACAAATTTGATGAGAAGCTGCTTCTTGGGGTTGGTGGTTTTGGGAGGGTTTATAAAGGAACACTTGAAGATGGCACCAATGTAGCTGTCAAAAGAGGCAACCCCAGGTCTGAACAAGGCATTGCTGAATTTAGAACAGAAATCGACATGTTGTCCAAGCTTCGCCATCGTCATCTTGTGTCTCTCATAGGCTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATATATGGCTAATGGTCCCCTTAGAAGCCATTTGTATGGAGCTGATCTGCCACCTCTATCATGGAAGCAGCGGCTTGAAATTTGCATTGGAGCAGCTAGGGGCCTCCATTATCTTCACACTGGTGCAGCTCAAAGCATAATACACAGAGATGTAAAGACAACAAACATCCTCTTGGATGACAATTTTGTTGCCAAAGTTGCTGACTTTGGCCTCTCAAAAACTGGTCCTGCTCTGGATCAGACCCATGTAAGCACCGCGGTGAAAGGAAGCTTCGGTTATCTTGATCCTGAGTACTTCAGAAGGCAACAACTCACAGACAAATCAGATGTCTATTCATTTGGAGTAGTGCTAATGGAAGTATTATGCACAAGACCAGCTTTGAATCCTGTCCTTCCAAGGGAGCAAGTTAACATAGCTGAGTGGGCAATGACCTGGCAGAAGAAGGGCATGCTTGATCAGATAATGGATCAAAATCTGGTGGGGAAGGTGAGTCCTGCTTCTCTGAAGAAGTTCGGGGAGACGGCTGAGAAATGCTTGGCCGAGCACGGCGTGGACAGGCCATCCATGGGGGATGTATTGTGGAACCTTGAATATGCACTGCAGCTTCAAGAGACCTCTTCAGCACTCACAGAACCTCAAGATAATAGCACAAATCACATTACTGGGATTCAGCTGACCACACTTGAGCCATTTGATAACAGTGTAAGTATGATCGATGGAAGTAACTCTGTCACAGATGATGATGCAGAAGATGCTGCCACAAGTGCTGTGTTCTCACAATTGGTAAATCCTCGAGGAAGATAA 2526 0.4287 MKIVKWVSFVLAMFSFLVDESFASYTPPDNYLIACGSSQNITFQGRTFVPDSQHSSLVLETGNSIVAANSSSRVPFPIYQSARIFTEKASYNFEIQQQGRHWVRLYFFPVKNPSHDLTSASLTVVTDEFVLLNNFTFKNYNGSYMFKEYAINVTSDTLTLTLIPSNGSVVFVNGIEVVSMPNDLFIDQALALIPSEPFSGLSVLAFETVYRLNMGGPLLNAQNDTLGRTWENDLKYLHVNSSVLNVSVSPSTIKYPAGVSPETAPNWVYATAETMGDANVAQNSFNVTWVFPVDPNFSYLIRAHFCDIMSISLNSLVFDMFVNSDIALRSLDLSSITGNLAVPYYRDFVSNASTDSNTLSVSVGPDSVADITNATMNGLEIMKISNSLKSLDGLSSVESLLPSSSSKANKIGIIVGSSVGAVAAIALVGLCYYCCIVRRQSKSPQQGHSWLPLPLYGNSQTLTKSTLSQKSGTASCISIASTNLGRFFSFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGIAEFRTEIDMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKVSPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALTEPQDNSTNHITGIQLTTLEPFDNSVSMIDGSNSVTDDDAEDAATSAVFSQLVNPRGR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00941 841 Gene3D - 204 386 - -
Accr13g00941 841 Gene3D - 30 181 - -
Accr13g00941 841 CDD STKc_IRAK 506 771 - -
Accr13g00941 841 Gene3D Transferase(Phosphotransferase) domain 1 576 796 - -
Accr13g00941 841 SMART serkin_6 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00941 841 FunFam Putative receptor-like protein kinase 30 181 - -
Accr13g00941 841 PANTHER OS07G0166700 PROTEIN 486 777 IPR045272 GO:0004714|GO:0006468
Accr13g00941 841 Gene3D Phosphorylase Kinase; domain 1 459 575 - -
Accr13g00941 841 FunFam Receptor-like protein kinase FERONIA 576 791 - -
Accr13g00941 841 SUPERFAMILY Protein kinase-like (PK-like) 479 771 IPR011009 -
Accr13g00941 841 ProSiteProfiles Protein kinase domain profile. 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00941 841 FunFam receptor-like protein kinase FERONIA 463 575 - -
Accr13g00941 841 FunFam Receptor-like protein kinase FERONIA 205 386 - -
Accr13g00941 841 Pfam Malectin-like domain 33 384 IPR024788 -
Accr13g00941 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Accr13g00941 841 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Accr13g00941 841 Pfam Protein tyrosine and serine/threonine kinase 505 767 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00941 Accr-Chr13 11138425 11140950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00941 23 781 Receptor kinase-like Gene Family AT2G21480 54.275 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Accr13g00941 Malectin_like 5.1e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00941 - - gmx:100809700 1389.4