Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00925 ATGGAGAGTTTCAGAGTTCTGTATCTTTACTTCTTGCTGATCTGCTTTATAAAACCCTTCACTTCACAAGACATCATCGCCCCAGGGAACTTGCTTAGAGATGGCGAGACTTTAGTTTCCTCAAGTGGGTTTTTTGAACTTGGATTCTTCAGCCCTGGCTCTTCAAATGGCCGATACTTAGGGGCATGGTATAAGAAGTCTCCTTCTACAATCTTCTGGGTGGCCAACCGAGACAAACCTCTTAACAATGGTAGGAGAAATGGTGTTTTGGAATTAAATGATCAGGGAGTTCTCTTACTTCTTGATTCCACAAACAACAACACGGTGTGGTCCTCCAATTATTCATCAACCAGAAACAGAGCATATAACCCTTTTGCTCAACTCTTGGATTCTGGGAACCTCGTGGTGGAAAATGGATATGGTAGTAGCAATGGTGGTAACTTGGACCAACTCTTATGGCAGAGTTTTGACCATCCATGTGACACCATAATGCCAGGAATGAAGCTTGGTTGGGATCAAGAAACGGGTTTGGATAGATTTGTGTCATCTTGGAAAAGTTCCGATAATCCAGGTCGTGGAGATTATGTAGTCAAAATAGACCGTAGAGGGTACCCACAAAGCGTTCAACTAAAAGGTTCTAAGTTGATGGTCAGAGCAGGGTCATGGAATGGCTTCGCTTTCACTGGATTTTCAAATCATAATCCGAATCCAGTAATAAATGCTGAGTTTGTATTGAATGAGAAGGAGGTATATTACAAGTTTGATCTTATGAATAATTCAGTTTTCTCTAGATTTATAATGAACCCTTCAGGCACAGGGCAGATTTTTTATTGGGAAATTCAAACAAGCAGCTGGCAGTTAGTGACCACTGGTCCCCCAGACCTGTGTGACAATTATGCCTGGTGCAGCGCAAATTCCATCTGCAACATTGATAACAATCCTGTTTGTGAATGCCTAAAAGGGTATGAACCCAAGAACATTAAGGAATGGAATGTATCCAATTGGAGCAGTGGCTGCACTAGAAAGGTTGCTTTGAGCTGTGATGCTAGTGATGGATTTATAAAGTATACAGGCATCAAGTTGCCAGACACTTCTTCTTCATGGTATAACACGACCATGGATCTTGAGGAATGTATGAGATCATGTCTGCAAAACTGTTCTTGTAAAGCATATTCGAATGTGGACATACGAGGTGAAGGAAGTGGGTGTCTGATATGGTTAGATCAACTGTTGGACATGAGACAATTTCCTGCAGGGGGACAAGACATCTATGTACGAGTTTCTGCTTCTGAGCTAGTGTCAGATCATTATAGGAATAAAGGCCGTGGGAGCATTGCCAAGAAGAAGCTGGTAGGAGTTGCGGTTGGCAGTGCAATATTTGTAATGAGTTTAATGCTTCTTGGATTGATTTTAATCATAATAAAAAGGAAACGTCAAAATTCCGGAAAAAACGTCATGGATATTCCAATATTTGATCTCTCGGTTATGATCAAGGCTACTGATAATTTTTCCACCCTTAACAAATTGGGTGAAGGTGGCTTTGGGTTAGTATATAAGGGTACTCTAGAAGATGGGAAAGAGTTAGCTGTGAAAAGATTGTCAACAAAATCTGGCCAAGGGTTGCAAGAGTTGAAAAATGAAGTTGTGCTTATAGCAAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGTTGTTGCATTGAAGGAGAAGAGAAGTTATTGATTTATGAATATATGTCAAATAAGAGTTTGGACAACTTCATTTTTGATGAAACTCACAGCAACCGGTTGGATTGGCCTAAGCGTTGGCATATTATTCATGGAATTGCTTGA 1833 0.4064 MESFRVLYLYFLLICFIKPFTSQDIIAPGNLLRDGETLVSSSGFFELGFFSPGSSNGRYLGAWYKKSPSTIFWVANRDKPLNNGRRNGVLELNDQGVLLLLDSTNNNTVWSSNYSSTRNRAYNPFAQLLDSGNLVVENGYGSSNGGNLDQLLWQSFDHPCDTIMPGMKLGWDQETGLDRFVSSWKSSDNPGRGDYVVKIDRRGYPQSVQLKGSKLMVRAGSWNGFAFTGFSNHNPNPVINAEFVLNEKEVYYKFDLMNNSVFSRFIMNPSGTGQIFYWEIQTSSWQLVTTGPPDLCDNYAWCSANSICNIDNNPVCECLKGYEPKNIKEWNVSNWSSGCTRKVALSCDASDGFIKYTGIKLPDTSSSWYNTTMDLEECMRSCLQNCSCKAYSNVDIRGEGSGCLIWLDQLLDMRQFPAGGQDIYVRVSASELVSDHYRNKGRGSIAKKKLVGVAVGSAIFVMSLMLLGLILIIIKRKRQNSGKNVMDIPIFDLSVMIKATDNFSTLNKLGEGGFGLVYKGTLEDGKELAVKRLSTKSGQGLQELKNEVVLIAKLQHRNLVKLLGCCIEGEEKLLIYEYMSNKSLDNFIFDETHSNRLDWPKRWHIIHGIA 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00925 610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 578 - -
Accr13g00925 610 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Accr13g00925 610 ProSiteProfiles PAN/Apple domain profile. 347 428 IPR003609 -
Accr13g00925 610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 156 - -
Accr13g00925 610 Pfam S-locus glycoprotein domain 218 326 IPR000858 GO:0048544
Accr13g00925 610 Pfam D-mannose binding lectin 70 185 IPR001480 -
Accr13g00925 610 Gene3D - 18 156 IPR036426 -
Accr13g00925 610 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Accr13g00925 610 CDD B_lectin 30 159 IPR001480 -
Accr13g00925 610 SMART tyrkin_6 503 610 IPR020635 GO:0004713|GO:0006468
Accr13g00925 610 Pfam Protein tyrosine and serine/threonine kinase 505 609 IPR001245 GO:0004672|GO:0006468
Accr13g00925 610 ProSiteProfiles Protein kinase domain profile. 503 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00925 610 Gene3D Hepatocyte Growth Factor 344 424 - -
Accr13g00925 610 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 607 - -
Accr13g00925 610 SMART ntp_6 348 427 IPR003609 -
Accr13g00925 610 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Accr13g00925 610 Pfam PAN-like domain 347 413 IPR003609 -
Accr13g00925 610 SUPERFAMILY Protein kinase-like (PK-like) 485 610 IPR011009 -
Accr13g00925 610 SMART blect_4 29 159 IPR001480 -
Accr13g00925 610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 346 427 - -
Accr13g00925 610 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 190 IPR036426 -
Accr13g00925 610 CDD PAN_AP_plant 343 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00925 Accr-Chr13 10926194 10928388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00925 435 610 Receptor kinase-like Gene Family AT4G23190 47.253 1.10e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00925 B_lectin 3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00925 - - lja:Lj3g3v0685950.1 688.723