Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00923 ATGGAGATTTTCAGAGTTCTGTATCTTTACTGCTTGCTGCTCTGCTTTATAAAACCGATCACATCACGAGACATCATCACCCCAGGAATCTTGCTTAGAGATGGCAAGACTTTAGTTTCATCAAGTGGGTTGTTTGAACTTGGATTTTTCAGCCCTGGCTCTTCAAATGCTCGGTACTTAGGGGCATGGTATAAGAAGTCTCCTTCTACAATCTTCTGGGTGGCTAACCGTGACAAACCTCTCAACAATGGTAGGAGAAATGGTGTTCTGCAATTAAATGACCGAGGAATTCTCTTACTTCTTGATTATACAAACAACAACACAGTGTGGTCCTCCAATTATTCATTAAACAGAGCATATAACCCTTTTGCTCAACTCTTGGATTCTGGCAACCTCGTGGTGAAAAATGGATATGGTAGTGGTAATAGTGGTAACTTGGACCAGCTCTTATGGCAGAGTTTTGACCACCCATGTGACACCATAATGCCGGGAATGAAGGTTGGCTGGGATCAAGAAACGGGTTTGGATAGATTTGTGTCGTGTTGGAAAAGTTCAGATGATCCAGGTCGTGGAGATTATGTAATCAAAATAGACCGTAGAGGGTACCCACAAAGCGTTCAACTGAACGGTTCGAAGGTGATGGTTAGAGCAGGGCCATGGAATGGCTTCACTTTCACTGGATTTCCAAATCATAATCAGAATCCAGTAATGAATGTTGAGTTTGTGTTGAATGAAAAGGAGGTATATTACAAGTTTGATCTTATGAATAATTCAGTTTTCTCTAGAATTATAGTGACCACTTGGGGCACAGGGCAGATTTTTTATTGGGAAATTCAAACAAGCAGATGGCAGTTAGTGACCACTAGTCCCCCAGACCTGTGTGACAATTATGCCTGGTGCAGGGCAAATTCTATCTGCAACATTGATAACATTCCTGTTTGTGAATGCCTGAGAGGGTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGATTGGTACAGTGGCTGCACTAGAAGGGTTTCTTTGGATTGTGAAGCTAGTGATGGGTTTAAAAAGTACACAGGCATCAAGTTGCCAGACACCACTTCATCATGGTATAACAAGACCATGAACCTTGAGGAATGTAAGAGATTATGTCTGCAAAACTGTTCTTGCAAGGCATATTCAAATTTGGATAGTAAAGATGAAGGAAGTGGCTGCCTCGTATGGTTTGAGGAGCTGTTGGACATGAGACAATTTCCTGCAGGGGGACAAGATCTCTATGTACGAGTTCCTGCTTCGGAGATAGATCTTTTTGGGAATGGAGGGCATGGAAGCATTAGCAAGAAGAAGCTAGCAGGAATTATGGTTGGCTCTGTAGTGACTATCTTCATAATAATTTTTGGATTGATATCAATCAAAAGGAGAAGGAAACTTAAAAAATCAGAGAAGGAAGTCATGGATCTACCTACATTTGACTTGTCAATTATAGCTAAAGCTACTAGTAATTTTTCAATCATTAACAAGTTGGGAGAAGGTGGCTTTGGACCAGTATACAAGGGCACACTAGAAGATGGGAAAGAGGTAGCTGTGAAAAGGTTGTCAACAAAATCTGGTCAAGGGTTGGAAGAGTTGAAAAATGAAGTTGGGTTGATAGCAAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGTTTCTGCATTGAAGGAAAAGAGAAGTTGTTGATTTATGAGTATATGCCAAACAAGAGCTTGGACCACTTTGTTTTTGACAAATCTCAAAGTAGCTTGTTGGATTGGCTTAAGCGTTGGAATATTATTCATGGCATTGCTCGAGGGCTTGTTTATCTTCATATAGATTCTAGATTGAGAATTATTCATAGAGACCTTAAAACCAGCAATATTCTTCTAGATGCTTACATGAATCCGAAGATATCAGACTTTGGCTTGGCTCGTACATTCTGGGATGATCAAGTTGAAGCCAACACTAACAAAGTTGTTGGGACATATGGATATATGCCTCCTGAGTATGCTGTGCACGGACAATTTTCAATGAAATCTGATATCTTTAGCTTTGGTGTAATGGTCCTTGAGATTGTCAGTGGGAAGAAGAATAGAGGATTTGCAGACCCAGAGTACAACCTTAATCTTCTTGGACATGCATGGAGACTATGGATCCAAGGAAGACCAATGGAACTATTGGATGAATGTTTAAATGAAAGTTGCATTGAATCTGAAGTCATAAGATGTATACAAGTAGGACTATTATGTGTTCAACAAAGAGCTGAAGATCGGCCTGATATGTCAGTTGCAGTTCTAATGTTGAACGGCGAGAAATTGTTGCCACAACCAAAGGTTCCTGCATTTTACACTGCAAGTGATATTCCTCCTAATCCAACTTCTTTAGAACAAAAATGTACACAGTTCTCACAAAATGAAATTTCTCAAACCACTCTAGAAGGAAGATGA 2451 0.4011 MEIFRVLYLYCLLLCFIKPITSRDIITPGILLRDGKTLVSSSGLFELGFFSPGSSNARYLGAWYKKSPSTIFWVANRDKPLNNGRRNGVLQLNDRGILLLLDYTNNNTVWSSNYSLNRAYNPFAQLLDSGNLVVKNGYGSGNSGNLDQLLWQSFDHPCDTIMPGMKVGWDQETGLDRFVSCWKSSDDPGRGDYVIKIDRRGYPQSVQLNGSKVMVRAGPWNGFTFTGFPNHNQNPVMNVEFVLNEKEVYYKFDLMNNSVFSRIIVTTWGTGQIFYWEIQTSRWQLVTTSPPDLCDNYAWCRANSICNIDNIPVCECLRGYEPKNFKEWNVSDWYSGCTRRVSLDCEASDGFKKYTGIKLPDTTSSWYNKTMNLEECKRLCLQNCSCKAYSNLDSKDEGSGCLVWFEELLDMRQFPAGGQDLYVRVPASEIDLFGNGGHGSISKKKLAGIMVGSVVTIFIIIFGLISIKRRRKLKKSEKEVMDLPTFDLSIIAKATSNFSIINKLGEGGFGPVYKGTLEDGKEVAVKRLSTKSGQGLEELKNEVGLIAKLQHRNLVKLLGFCIEGKEKLLIYEYMPNKSLDHFVFDKSQSSLLDWLKRWNIIHGIARGLVYLHIDSRLRIIHRDLKTSNILLDAYMNPKISDFGLARTFWDDQVEANTNKVVGTYGYMPPEYAVHGQFSMKSDIFSFGVMVLEIVSGKKNRGFADPEYNLNLLGHAWRLWIQGRPMELLDECLNESCIESEVIRCIQVGLLCVQQRAEDRPDMSVAVLMLNGEKLLPQPKVPAFYTASDIPPNPTSLEQKCTQFSQNEISQTTLEGR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00923 816 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
Accr13g00923 816 SMART serkin_6 498 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00923 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 573 - -
Accr13g00923 816 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Accr13g00923 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Accr13g00923 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 759 - -
Accr13g00923 816 CDD PAN_AP_plant 341 426 - -
Accr13g00923 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 154 - -
Accr13g00923 816 CDD STKc_IRAK 504 771 - -
Accr13g00923 816 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00923 816 SUPERFAMILY Protein kinase-like (PK-like) 477 769 IPR011009 -
Accr13g00923 816 Gene3D Phosphorylase Kinase; domain 1 463 573 - -
Accr13g00923 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 188 IPR036426 -
Accr13g00923 816 SMART blect_4 29 157 IPR001480 -
Accr13g00923 816 SMART ntp_6 346 425 IPR003609 -
Accr13g00923 816 Pfam D-mannose binding lectin 70 183 IPR001480 -
Accr13g00923 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Accr13g00923 816 Gene3D - 19 154 IPR036426 -
Accr13g00923 816 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Accr13g00923 816 Pfam PAN-like domain 345 411 IPR003609 -
Accr13g00923 816 CDD B_lectin 31 157 IPR001480 -
Accr13g00923 816 Pfam Protein tyrosine and serine/threonine kinase 500 706 IPR001245 GO:0004672|GO:0006468
Accr13g00923 816 Gene3D Hepatocyte Growth Factor 342 422 - -
Accr13g00923 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Accr13g00923 816 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Accr13g00923 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 344 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00923 Accr-Chr13 10906937 10910667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00923 427 787 Receptor kinase-like Gene Family AT4G23190 51.882 7.53e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00923 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00923 - - pcin:129299332 960.674