Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00922 ATGAACAAAATGATGCCCAGTTTCAGGGTTCTGTATCTATACTTGTTGCTGCTCTGCTTCATAGAGTCACTCACTTCACAAGACACGATCACTCAAGGAAACTTCATTAGAGATGGCGAGACTTTAGTTTCCTCAAACGGGTTTTTTGAACTTGGATTCTTCAGCCCTGGCTCTCCAACTCTCAGATACTTGGGAATATGGTACAGGAAATCTCCTTCCACAGTCTTCTGGGTAGCCAACCGAAACATATCCATCAACAACGATAACGGAAAGGGCCTTTTGCGATTAAATGATCAAGGGGTTCTTCTTCTTCTTGATGCAAAAAACAACACCATGTGGTCTTCCGACAATTCATCAACCACTACCAGAATCAAAGCAAATAACCCTTTTGCCCAGCTCTTGGATACGGGGAATCTGGTGGTGAAAAATGATGCCTTGGACCCAGTATGGCAGAGTTTTGATTATCCTTGTGACACCTTGATGCCTGGAATGAAGCTTGGGTGGGATCAAGAAACGGGTCTGGATAAAGTTCTGTCATCTTGGAAAAGCTCAGATGATCCAAGTCAAGGAGATTACATAAACAAAATAGACCGTAAAGGGTATCCACAATACTTTCAACTGAGGGGCTCCAAAGTCATGTATAGAGCTGGGTCATGGAATGGCAAGACTTTTACAGGGCTACCAAATCCTAATCCAGATCCTTTAGTTACTAGTGATTTTGTGGTGAATGAAAAAGAGGTGTACTTTACGTCTGAGCTGAGAAATAATTCGATTTTCTCCAGATTTGTATTGCTCTCATCTGGGGTTGCGCAGCGTTTTGATTGGGTAATTCAAACAAGCAGCTGGCAGGTAACGAGCACTGCTTCTCTTCTCCAGTGTGAAAATTATGCCTTCTGTGGTGCAAATTCTATCTGCAACAGTAGTGACAATCCTGTTTGTAAATGCCTGAGGGGGTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGTTTGGAACAGTGGCTGCACTAGACGGGTCTCTTTGGACTGTGGTGGTGGTGATGGGTTTAAGCTGTACACAAGCATCAAGTTACCAGACACCTCTTTTTCATGGTACAACACGACCATGAACCTTGGGGAATGTAAGAAAACATGTCTGCAAAACTGTTCTTGTGCAGCTTATTCGAATTTGGATATACGAGGTCAAGGAAGTGGCTGCCTCCTTTGGCTTGGCCAACTGTTGGACATGAGACAATTTCCTGAAGGGGGACAAGACCTTAATGTACGAGTTCCTGCTTCAGAGCAAGATCATTTTAGGAATGAAGGCCGTGGGAGTATTGGCAAGAAGACGGTAGCAGGAATTGTGGTTGGCTGTGCAATATTTGTAATGAGTTTCATGATTCTTGGACTAACTTTAATTGCATGGAAAAGGAAACTTCGAAATTCTGGGAAAGAAGTCATGGATATTCCAATATTTGATCTATCAATCATAACTAAGGCTACTGATAATTTTTCTACCATTAACAAATTGGGTGAAGGTGGCTTTGGGCCAGTATACAAGGGTACTTTAGAAGATGGACAAGAGTTAGCTGTGAAAAGGTTGTCAGCAAAATCAGGTCAAGGGATTGAAGAGTTGAAAAATGAAATTGTGCTGATAGCAAAACTTCAACATCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGTAGAAGACGAGAAGTTGTTGATTTATGAATATATGCCAAATAAGAGCTTGGACCAGTTTATTTTTGATGTAACTCGTAGCAACCTGTTGGATTGGCCTAATCGTTGGAATATTATTCATGGCATTGCTCGAGGACTTGTCTATCTTCATATAGATTCTAGATTGAGAATCATTCATAGAGACCTTAAAACCAGCAATATTTTGCTAGATGCTTACATGAATCCAAAAATATCAGATTTTGGTCTAGCTCGCACATTTTGGGATGATCAAGTTGATGCCAACACTGACAAAATTGTGGGAACACATGGATATATGCCTCCCGAATATATTTTGCATGGACGTTTTTCAATGAAATCCGATGTCTTTAGCTTTGGCGTAATAGTGCTAGAAATTGTTATTGGGAAGAAGAACCGGGGATTTTTAGACCAAGAATACGGCCTTAATCTTCTTGGACATGCATGGAGATTGTGGATCCAAGGAAGACCAATGGAACTGTTGGATGAATGTTTAAAGGAAAGCTGCAATGAATCTGAAGTCATAAGATGCATACACGTAGGACTATTGTGTGTTCAACAGAAAGTTGAAGATAGGCCTGATATGTCAACTGTGGTTCTAATGTTAAATGGTGAGAAGTTGTTGCCACAACCAAAAGTTCCTGGTTTTTACACTGCTGATGGTGATGGCCTTGCTGATTCAAAACATGAAATTTCTCAAAATGAAATTTCTCAAACCATGCTAGAGGGAAGATGA 2436 0.4085 MNKMMPSFRVLYLYLLLLCFIESLTSQDTITQGNFIRDGETLVSSNGFFELGFFSPGSPTLRYLGIWYRKSPSTVFWVANRNISINNDNGKGLLRLNDQGVLLLLDAKNNTMWSSDNSSTTTRIKANNPFAQLLDTGNLVVKNDALDPVWQSFDYPCDTLMPGMKLGWDQETGLDKVLSSWKSSDDPSQGDYINKIDRKGYPQYFQLRGSKVMYRAGSWNGKTFTGLPNPNPDPLVTSDFVVNEKEVYFTSELRNNSIFSRFVLLSSGVAQRFDWVIQTSSWQVTSTASLLQCENYAFCGANSICNSSDNPVCKCLRGYEPKNFKEWNVSVWNSGCTRRVSLDCGGGDGFKLYTSIKLPDTSFSWYNTTMNLGECKKTCLQNCSCAAYSNLDIRGQGSGCLLWLGQLLDMRQFPEGGQDLNVRVPASEQDHFRNEGRGSIGKKTVAGIVVGCAIFVMSFMILGLTLIAWKRKLRNSGKEVMDIPIFDLSIITKATDNFSTINKLGEGGFGPVYKGTLEDGQELAVKRLSAKSGQGIEELKNEIVLIAKLQHRNLVKLLGCCIVEDEKLLIYEYMPNKSLDQFIFDVTRSNLLDWPNRWNIIHGIARGLVYLHIDSRLRIIHRDLKTSNILLDAYMNPKISDFGLARTFWDDQVDANTDKIVGTHGYMPPEYILHGRFSMKSDVFSFGVIVLEIVIGKKNRGFLDQEYGLNLLGHAWRLWIQGRPMELLDECLKESCNESEVIRCIHVGLLCVQQKVEDRPDMSTVVLMLNGEKLLPQPKVPGFYTADGDGLADSKHEISQNEISQTMLEGR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00922 811 CDD PAN_AP_plant 340 425 - -
Accr13g00922 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 153 - -
Accr13g00922 811 Pfam D-mannose binding lectin 74 182 IPR001480 -
Accr13g00922 811 SUPERFAMILY Protein kinase-like (PK-like) 481 782 IPR011009 -
Accr13g00922 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 187 IPR036426 -
Accr13g00922 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Accr13g00922 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Accr13g00922 811 SMART serkin_6 498 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00922 811 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Accr13g00922 811 Pfam PAN-like domain 344 410 IPR003609 -
Accr13g00922 811 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
Accr13g00922 811 Gene3D - 22 153 IPR036426 -
Accr13g00922 811 SMART ntp_6 345 424 IPR003609 -
Accr13g00922 811 Gene3D Phosphorylase Kinase; domain 1 468 573 - -
Accr13g00922 811 Gene3D Hepatocyte Growth Factor 341 422 - -
Accr13g00922 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 573 - -
Accr13g00922 811 ProSiteProfiles Protein kinase domain profile. 498 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00922 811 CDD STKc_IRAK 504 771 - -
Accr13g00922 811 CDD B_lectin 34 156 IPR001480 -
Accr13g00922 811 ProSiteProfiles Bulb-type lectin domain profile. 27 154 IPR001480 -
Accr13g00922 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 424 - -
Accr13g00922 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Accr13g00922 811 SMART blect_4 33 156 IPR001480 -
Accr13g00922 811 Pfam Protein tyrosine and serine/threonine kinase 500 766 IPR001245 GO:0004672|GO:0006468
Accr13g00922 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 760 - -
Accr13g00922 811 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00922 Accr-Chr13 10808104 10811443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00922 486 784 Receptor kinase-like Gene Family AT4G11480 60.133 1.54e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00922 PK_Tyr_Ser-Thr 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00922 - - pcin:129299332 939.102