Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00916 ATGGCCATCCTTCCTTATGTGATTGTTGTTCTCAAAATGCTTCTGTTCTCGCGATTATCTTCTGCCATTGATACTATTTCAAAGTCCCAGCCCCTTCAAGATGATGGAAGAACCACCTTGGTGTCTAAAGATGGAACATTTGAGCTTGGTTTCTTCAGCCCAGGTAGTTCCAAAAACCGTTATATTGGAATCTGGTACAAAAATATTCAACCTAGAGCTGTCGTCTGGGTGGCAAACCGTGAGATACCGGTCAAAGATAACTCAGGCATGTTGACCATAAACACGGAGGGACATCTTGGGCTTCTTGACCGGAACGAGACAATTATTTGGGTGGCAAATTCATCAACAAAGGCCTTGACTCCAATTGTGCAGCTTTTAGGCTCTGGGAATTTGATACTAAGAGATGAGAAAGACCAAAATCCACAAAATTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACCATTTTGCCAGGTATGAAGCTTGGATGGGACCTCAGAACTGGTCTAAATAGGCGTATCATAGCATGGAAGAATTGGGATGACCCATCTCCTGGAGATTTCACAGGTCAGCTCATGGTTCATGATTTCCCAGAAGTAGTTGTTTGGAAAGGTCGAACAAAATATCTAAGGAGTGGCCCTTGGGATGGTCAACAATTTAGTGGCACTTCACTAGCTACGGATGGCTCCCCTTTTGTGTCTGTGCTTGTCTCTAATAAATATGAAGTTTATTACACATTCAACACAAAAATTGAGTCGTTTTTGGCAAGATCTGTTTTTAACCAATCAACATACACTGTCGAATTAATATGGAAGAAAGATGATCAAAGATGGAAGAATTGGAGCATCTCTCCAAAAGACAACTGCGATACATATAATCTTTGTGGTCCAAATGGAAATTGTGTCATAGGTGGGGCACCGATATGCCAGTGCTTAAGAGGATTCACACCAAAATCTCCAAACAACTGGGATGCTTTGGATTGGAGTGAAGGCTGTGTTCGAAGTGAATCCTGGAGCTGCAAGGTAAAAAACAAAGATGGGTTTTTGAAAATGACTGGGCTCAAATTACCAGAGACTACACATACTTGGGTTGATGCTAGTATGACACTTGAGGAGTGCAAAGCAAAGTGCATAGAGAATTGTTCTTGTACTGCTTATTCTAATTCAGATACTGTTAGTTCTAGGGGTTGTGCCATTTGGTTTGGTGCTCTAATTGACATAAGGGAGGTCTCCCTTAATGCTGATCTAGATCTATATATTCGCCTTGCAGCTTCAGAAACAGCTGAAGTTAGAGATGGTGGCAGGAATAACACAAAGGTGATTGTGGTCTTAGCTACCATTGTGTTTGCTTTTGTGATTGTTATAATTTTCCTCTGCATTTACAAAACGAGAAGAAAATATAGAGAAGGAAATGATGTTGAAGAATCAAAAAGAGATATGGAAATTCCTTTCTATAACTATGTTGTGATAGTTACTGCCACTAACAATTTCTCAATTGACAAGAAGCTTGGTCAAGGTGGGTTTGGACCTGTTTATAAGGGTACATTAGCAGATGGACAAGAGATTGCTGTGAAGCGGCTTTCTAAAACCTCTCACCAAGGAATGAAAGAATTTAAGAATGAGGTTATATTGTGCTTTAAACTTCAACATCAGAATCTTGTTAAAGTTCTTGGTTGTTGCATCAAAGGAGAAGAGAAGATGCTTATATATGAATACATGTCCAACAAGAGCCTAGATTCATGGATTTTTGGTTCTATTACTCAACGTAATACGCTTGATTGGTCCAAACGTTTCCAGATTATATGTGGAATAGTTCGTGGGCTTCTATATCTTCATCAGGATTCTAGATTGAAGATTATCCATAGAGATCTTAAGGCAAGCAATGTATTGTTAGACAATGAGATGAACCCAAAAATTTCAGATTTTGGCTTGGCAAGGATTTTTGGAGGAGGTCAAATTGAAGAAAATACAAATAAGGTGGTTGGTACATATGGATATATGGCCCCTGAATATGCCTATAATGGAATATTCTCTATCAAATCAGACGTATTCAGCTTTGGAATATTACTACTAGAAACAGTGAGTGGAATGAAAAGCAGAGGACTTTCCTATCCAAACCAATGTCTTAATCTTATAGGGCATGTTTGGAGGTTGTGGAAGGAGAGCATGCCATTAAAATTGATTGATGCCTGTTTGGAAGACTCTTTTATTGTATCAGAAGCATTGCGCTGTATCCATATCAGTCTCCTTTGCGTGCAGCACCATCCTGATGATAGACCAAACATGGCCTCAGTGGTTATGATGTTAAGCAATGAGAGTGACTTGCCTCAACCCAAAGAGCCTGCTTTCCTTTTAGAAAGGAGTCCAGGTAGACAAGAATCTGCTCAAAACAATCATATAAGTTCTTCCATTAATGAAATGTCTTTTACCGAGTTAGATGCCAGATGA 2448 0.395 MAILPYVIVVLKMLLFSRLSSAIDTISKSQPLQDDGRTTLVSKDGTFELGFFSPGSSKNRYIGIWYKNIQPRAVVWVANREIPVKDNSGMLTINTEGHLGLLDRNETIIWVANSSTKALTPIVQLLGSGNLILRDEKDQNPQNYLWQSFDYPSDTILPGMKLGWDLRTGLNRRIIAWKNWDDPSPGDFTGQLMVHDFPEVVVWKGRTKYLRSGPWDGQQFSGTSLATDGSPFVSVLVSNKYEVYYTFNTKIESFLARSVFNQSTYTVELIWKKDDQRWKNWSISPKDNCDTYNLCGPNGNCVIGGAPICQCLRGFTPKSPNNWDALDWSEGCVRSESWSCKVKNKDGFLKMTGLKLPETTHTWVDASMTLEECKAKCIENCSCTAYSNSDTVSSRGCAIWFGALIDIREVSLNADLDLYIRLAASETAEVRDGGRNNTKVIVVLATIVFAFVIVIIFLCIYKTRRKYREGNDVEESKRDMEIPFYNYVVIVTATNNFSIDKKLGQGGFGPVYKGTLADGQEIAVKRLSKTSHQGMKEFKNEVILCFKLQHQNLVKVLGCCIKGEEKMLIYEYMSNKSLDSWIFGSITQRNTLDWSKRFQIICGIVRGLLYLHQDSRLKIIHRDLKASNVLLDNEMNPKISDFGLARIFGGGQIEENTNKVVGTYGYMAPEYAYNGIFSIKSDVFSFGILLLETVSGMKSRGLSYPNQCLNLIGHVWRLWKESMPLKLIDACLEDSFIVSEALRCIHISLLCVQHHPDDRPNMASVVMMLSNESDLPQPKEPAFLLERSPGRQESAQNNHISSSINEMSFTELDAR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00916 815 ProSiteProfiles Protein kinase domain profile. 497 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00916 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Accr13g00916 815 SMART ntp_6 343 422 IPR003609 -
Accr13g00916 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Accr13g00916 815 Pfam Domain of unknown function (DUF3403) 770 815 IPR021820 GO:0004674
Accr13g00916 815 Pfam Protein tyrosine and serine/threonine kinase 498 768 IPR001245 GO:0004672|GO:0006468
Accr13g00916 815 Gene3D Hepatocyte Growth Factor 339 423 - -
Accr13g00916 815 SUPERFAMILY Protein kinase-like (PK-like) 479 769 IPR011009 -
Accr13g00916 815 Pfam D-mannose binding lectin 74 178 IPR001480 -
Accr13g00916 815 CDD B_lectin 39 152 IPR001480 -
Accr13g00916 815 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Accr13g00916 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 149 - -
Accr13g00916 815 Gene3D Phosphorylase Kinase; domain 1 460 572 - -
Accr13g00916 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 462 572 - -
Accr13g00916 815 SMART blect_4 29 152 IPR001480 -
Accr13g00916 815 Gene3D Transferase(Phosphotransferase) domain 1 573 780 - -
Accr13g00916 815 SMART serkin_6 497 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00916 815 CDD PAN_AP_plant 339 423 - -
Accr13g00916 815 CDD EGF_CA 287 319 - -
Accr13g00916 815 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Accr13g00916 815 Gene3D - 18 149 IPR036426 -
Accr13g00916 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Accr13g00916 815 CDD STKc_IRAK 503 769 - -
Accr13g00916 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 777 - -
Accr13g00916 815 Pfam PAN-like domain 340 407 IPR003609 -
Accr13g00916 815 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 760 - -
Accr13g00916 815 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Accr13g00916 815 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00916 Accr-Chr13 10654819 10657913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00916 452 815 Receptor kinase-like Gene Family AT4G23150 49.598 1.90e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00916 PK_Tyr_Ser-Thr 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00916 - - gmx:100786696 972.615