Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00912 ATGCCATGGATCACGCTGAATATATGCCTCATCCGCAGGTTTTCTTTTGCATCTGATATCCTTACCCAGTTAGAGTCTCTTCCTGATGGCCAGACCTTGGTTTCTGAAAATGAAATCTTTGAAATGGGTTTCTTCAGCCCAGGAACTTCCACAGACCGCTATGTTGGAATCTGGTACCACAAAATCCCTGGCAGAACTGTTGTTTGGGTTGCCAACAGAAACAGACCCTTCAAAAACAACTCTGGCCTGTTGAGCATAAACGCAGAGGGACATGCTGTACTTCTCAGCAATGATGACAATATTGTTTGGTTGGCAAATTCCACCAAAAAGGCCTTGAGTCCAATTTTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGAGAAGGGAAAGATCTAAAGCCCCAAAATTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACAATTTTGCCAGGAATGAAGTTTGGATGGGACCTGAGAACTCGCCTTAATCGACGTTCTACAGCTTGGAAGAATTGGGACGACCCTTCTACTGGAGACTTTGGAGCAGAGATTTTACTACACAATTATCCTGAGGTAGCAAACTGGCAGGGCCCAACAGAGCTTTCGAGGGTTGGCCCCTGGAATGGTGTCCGGTTTAGTGGCTATTCTCATGTGACGAGGAATCCACTTTATGAATTGAAGTTTGTCTGGAATAAAGATGAGGTGTACTTTGTTTATAAAATCATAAATGAGTCAATGATTACAAGAGTTGTCTTAAACCAAACATTATACTCTGTGGTGGACTCAATATGGAGCGAAGATGATCAAAGGTGGATTACTTTTAGCTTTTCGCCAGGTGATAATTGCGACATGTATAATCGTTGTGGTCCTAATGGAAACTGCGTCCTGGGTGAGACACCAATATGCCAGTGCTTGACAGGATTCTTGCCGAAATCACCCAAAAATTGGAATGCAATGGACTGGTCAAAAGGATGCATCCGCAATAAATCATGGAGTTGCAGGGGAAACAATAAGGATTATTTTGTCAAGTTTAGTGGGCTGAAATTGCCGGATACTACATACACGTGGGTTAATGCAAGTATGACTCTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGCAATGCTTACGCTAATTCAGATATCAGGGAAGGAGGTAGTGGTTGTGTTATGTGGTTCGGTGATTTAATTGATATAAGGCAGGTTCCCTTTGATGACCAGGATTTATATATTCGCCTTGCTTCTCCCGAAACAGCTGAACTCGATGAAGCTATTGGAAATAAGACAACGGTGATTGCTGTAACAGTGAGCACTGTGTTGGCTGTCGTGATGCTTATCACTTTGTTTTACATTTACATCCGCAGAAGAACCTCTATAGGAAACAAGGAAGAAGGCTCTGACGGAAATATGGAGCTACAAACCTTGATGGCAGAAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCAACGTATCTATGACCTTGCAGTGATAGCTAATGCTACTAATAACTTCTCACTAGACAACAAGCTTGGCGGAGGTGGTTTTGGTCTTGTATACAAGGGTATACTTGGTGATGGACAAGAAATTGCGGTGAAACGGCTCTCACAAAGTTCTTCCCAAGGGCTACGTGAATTTAAGAATGAAGTCAAACTCTGTGCTAAACTTCAACACCGTAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGGGAGGAGAAAATGCTTATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTAATGAAAGTCAACTTCTTGATTGGTCCAAGCGCTTTCACATTATCCGAGGAATTGCTCGAGGGCTTATGTATCTTCATCAAGATTCTAGATTAAAAATTGTCCATAGAGACCTTAAAGCAAGTAATATATTATTGGATAGTGAATTAAATCCAAAAATCTCAGATTTTGGTTTGGCAAGAATATTTGGAGGAGATAAAATTGAAGATAATACTAGGCAAATAGTTGGTACATATGGATATATGGCTCCTGAATACGCAATTCATGGACTATTCTCAATCAAGTCTGATGTGTTCAGTTTTGGAGTATTATTGTTAGAAATAGTGAGTGGCATGAAAAACAGGGGGTCCTTCTTATCAAGCCAAAGCATTAATCTCATTGGACATGCATGGAGGCTGTGGAATGAGGGAGTCCCACTAAAATTCGCCAATGAACATTTGGAGGGGTCTTATGTTGAATCAGAAGTACTGCGATGCATCCACATCGGTCTTCTTTGTCTACAATACAATGCTGATGATAGGCCAGACATAACATCTGTGGTTATAATGTTGAGCAGTGAGGGTGTGTTGCCTGAACCTAAAGAACCTGGTTTCCTTTTGGATCATATACCAGTTAAGGGAGAATCTCCTAATAATCATGCAACTCCTTCAAGTAATGAAATATCTATGACTATGTTAGAAGCCAGGTAA 2472 0.4086 MPWITLNICLIRRFSFASDILTQLESLPDGQTLVSENEIFEMGFFSPGTSTDRYVGIWYHKIPGRTVVWVANRNRPFKNNSGLLSINAEGHAVLLSNDDNIVWLANSTKKALSPILQLLGSGNLVLREGKDLKPQNYLWQSFDYPSDTILPGMKFGWDLRTRLNRRSTAWKNWDDPSTGDFGAEILLHNYPEVANWQGPTELSRVGPWNGVRFSGYSHVTRNPLYELKFVWNKDEVYFVYKIINESMITRVVLNQTLYSVVDSIWSEDDQRWITFSFSPGDNCDMYNRCGPNGNCVLGETPICQCLTGFLPKSPKNWNAMDWSKGCIRNKSWSCRGNNKDYFVKFSGLKLPDTTYTWVNASMTLEECKAKCWENCSCNAYANSDIREGGSGCVMWFGDLIDIRQVPFDDQDLYIRLASPETAELDEAIGNKTTVIAVTVSTVLAVVMLITLFYIYIRRRTSIGNKEEGSDGNMELQTLMAENNEEGYEGNMEQRIYDLAVIANATNNFSLDNKLGGGGFGLVYKGILGDGQEIAVKRLSQSSSQGLREFKNEVKLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDSFIFGNESQLLDWSKRFHIIRGIARGLMYLHQDSRLKIVHRDLKASNILLDSELNPKISDFGLARIFGGDKIEDNTRQIVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLEIVSGMKNRGSFLSSQSINLIGHAWRLWNEGVPLKFANEHLEGSYVESEVLRCIHIGLLCLQYNADDRPDITSVVIMLSSEGVLPEPKEPGFLLDHIPVKGESPNNHATPSSNEISMTMLEAR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00912 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Accr13g00912 823 Pfam Protein tyrosine and serine/threonine kinase 509 711 IPR001245 GO:0004672|GO:0006468
Accr13g00912 823 SMART serkin_6 508 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00912 823 Gene3D - 14 142 IPR036426 -
Accr13g00912 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 14 142 - -
Accr13g00912 823 ProSiteProfiles Bulb-type lectin domain profile. 18 139 IPR001480 -
Accr13g00912 823 CDD B_lectin 25 145 IPR001480 -
Accr13g00912 823 Pfam PAN-like domain 334 402 IPR003609 -
Accr13g00912 823 Pfam Domain of unknown function (DUF3403) 779 823 IPR021820 GO:0004674
Accr13g00912 823 SMART blect_4 24 145 IPR001480 -
Accr13g00912 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 786 - -
Accr13g00912 823 SUPERFAMILY Protein kinase-like (PK-like) 494 794 IPR011009 -
Accr13g00912 823 Pfam S-locus glycoprotein domain 204 313 IPR000858 GO:0048544
Accr13g00912 823 MobiDBLite consensus disorder prediction 804 823 - -
Accr13g00912 823 ProSiteProfiles PAN/Apple domain profile. 334 417 IPR003609 -
Accr13g00912 823 Gene3D Phosphorylase Kinase; domain 1 471 583 - -
Accr13g00912 823 SMART ntp_6 337 416 IPR003609 -
Accr13g00912 823 CDD STKc_IRAK 514 778 - -
Accr13g00912 823 PIRSF SRK 2 823 IPR024171 GO:0004674
Accr13g00912 823 ProSiteProfiles Protein kinase domain profile. 508 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00912 823 MobiDBLite consensus disorder prediction 802 823 - -
Accr13g00912 823 CDD PAN_AP_plant 333 417 - -
Accr13g00912 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 333 416 - -
Accr13g00912 823 Gene3D Hepatocyte Growth Factor 334 415 - -
Accr13g00912 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 583 - -
Accr13g00912 823 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Accr13g00912 823 Gene3D Transferase(Phosphotransferase) domain 1 584 783 - -
Accr13g00912 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 176 IPR036426 -
Accr13g00912 823 CDD TM_EGFR-like 431 465 - -
Accr13g00912 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 769 - -
Accr13g00912 823 Pfam D-mannose binding lectin 66 171 IPR001480 -
Accr13g00912 823 ProSiteProfiles EGF-like domain profile. 279 315 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00912 Accr-Chr13 10550345 10554258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00912 434 793 Receptor kinase-like Gene Family AT4G23190 51.233 5.01e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00912 PK_Tyr_Ser-Thr 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00912 - - pcin:129322539 1027.7