Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00909 ATGAAGTTTGGATGGGACCTGAGAACTGGTCTTAATCGACGTTATACAGCATGGAAGAATTGGGACGACCCTTCTTATGGAGACTTTTCAGCGGAGCTTGTACCACACAATTATCCTGATATAGTAGGCTGGCTGGGCCGAACAGAGTATATGAGGAGTGGCCCTTGGAATGGAGTCCGGTACAGTGGCGCCTCTCATGCGACGAGCAATCCACTATATAAAATAAAGTTTGTCCGGAATAAAGATGAGGTTTATTCAGAACATACTCTCATAAATGAGTCACTGATTGCAAGGTTTGTCTTCAACCAAACATTATACTCACTACTGGACATATTATGGAGTGAAAATGATCAAAGGTGGATGACTTATAGTTTTGCGCCAATGGATAATTGTGATAGATATAATCGTTGTGGTCCTAATGGAAACTGCGTCCTGGGTGAGACACCAATATGCCAGTGCTTGCCAGGATTCTTGCCAAAATCACCCAGAAATTGGAACGTTTTGGACTGGGCTGAAGGATGCATCCGCAATAAATCCTGGAGTTGCAAGGGAAAAAACAGTGATTATTTTGTCAAATTTAGTGGGCTGAAACTTCCAGATACAACATACTCTTGGGTTAATACAAGTATGACACTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATTCTAATTCAGATATCAGGGAAGGAGGTAGTGGTTGTGTTTTGTGGTTTAGTGATTTAGTTGATATAAGGCAGCTTCCCTTTAATGACCAGCATATTTATATTCGCCTTGCTTCTCCAGAAACAGCTGAACACGATGAAGCTAACGGAAATAAGACAAAGGTGATTGCTGCAACAGTGACCACTGTATTGGCTGTTGTGATGCTTCTCACTGTGTTTTACATTTACATACGCAGAAGAAACTCTATAGCAAATAAGGAAGAAGGTTCTGATGGAAATATGGAGCTAAAAACCTTGATAGCAGGAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCAACGAATTTATGACCTTGCAGTTATAGTAAATGCTACTAATAACTTCTCATTAGAAAACAAGCTTGGCGAAGGTGGTTTTGGTCCTGTATATAGGGGTATGCTCGTGGATGGACAAGAAATTGCGGTGAAACGGCTTTCACAAAGTTCTTCCCAAGGGCTAAGTGAATTTAAGAATGAAGTCAGATTATGTGCCAGGCTTCAACATCGTAATCTTGTTAAGGTTCATGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTCATTTATGAGTACATGCGCAACAAGAGCCTAGATTCGTTTATTTTTGGTTCTGAAAGTAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATCCGTGGAATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTAGATTAAAAATTGTCCATAGAGACCTCAAAGCAAGTAATATATTATTGGATGATGAATTAAATCCAAAAATATCAGATTTCGGTTTGGCAAGAATATTTGGTGGAGATCAAAATGAAGATAAAACAAAGCAAATAATTGGCACATTTGGATATATGGCTCCTGAATACGTAATTCATGGACTCTTCTCCGTCAAATCTGACGTGTTCAGCTTTGGAGTATTGCTGCTAGAAATAGTGAGTGGCAAGAAAAACAGGGGGGCCTTCTTGCCAAGCCAAAGCATTAATCTTATCGGACATGCATGGAAGTTGTGGAATGAGGGAGTCCCACTAAAACTCGCCAATGAACATTTGGAGAGGACTTACATTGAATCAGAAGTATTGCGATGCATTCACATTGGTCTTCTTTGTTTGCAATACCATGCTGATGATAGGCCAGACATGACATCTGTGGTTATAATGTTGAACAGTGAAGGTGTGTTGCCTGAGCCTAAAGAACCTGGTTTCCTTGTAGAAAACATCCCAGTTAGGGGAGAATCGTCTAACAATAATACAACTCCATCAAGTAATGAAGTATCTATCACTTTGTTAGAAGCCAGATAA 2016 0.3998 MKFGWDLRTGLNRRYTAWKNWDDPSYGDFSAELVPHNYPDIVGWLGRTEYMRSGPWNGVRYSGASHATSNPLYKIKFVRNKDEVYSEHTLINESLIARFVFNQTLYSLLDILWSENDQRWMTYSFAPMDNCDRYNRCGPNGNCVLGETPICQCLPGFLPKSPRNWNVLDWAEGCIRNKSWSCKGKNSDYFVKFSGLKLPDTTYSWVNTSMTLEECKAKCWENCSCNAYSNSDIREGGSGCVLWFSDLVDIRQLPFNDQHIYIRLASPETAEHDEANGNKTKVIAATVTTVLAVVMLLTVFYIYIRRRNSIANKEEGSDGNMELKTLIAGNNEEGYEGNMEQRIYDLAVIVNATNNFSLENKLGEGGFGPVYRGMLVDGQEIAVKRLSQSSSQGLSEFKNEVRLCARLQHRNLVKVHGCCIQGEEKMLIYEYMRNKSLDSFIFGSESKLLDWSKRFHIIRGIARGLMYLHQDSRLKIVHRDLKASNILLDDELNPKISDFGLARIFGGDQNEDKTKQIIGTFGYMAPEYVIHGLFSVKSDVFSFGVLLLEIVSGKKNRGAFLPSQSINLIGHAWKLWNEGVPLKLANEHLERTYIESEVLRCIHIGLLCLQYHADDRPDMTSVVIMLNSEGVLPEPKEPGFLVENIPVRGESSNNNTTPSSNEVSITLLEAR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00909 671 Gene3D Phosphorylase Kinase; domain 1 324 431 - -
Accr13g00909 671 SMART serkin_6 356 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00909 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 181 264 - -
Accr13g00909 671 CDD STKc_IRAK 362 627 - -
Accr13g00909 671 SUPERFAMILY Protein kinase-like (PK-like) 340 632 IPR011009 -
Accr13g00909 671 Pfam PAN-like domain 182 250 IPR003609 -
Accr13g00909 671 ProSiteProfiles EGF-like domain profile. 127 163 IPR000742 -
Accr13g00909 671 Pfam Protein tyrosine and serine/threonine kinase 357 623 IPR001245 GO:0004672|GO:0006468
Accr13g00909 671 CDD EGF_CA 129 157 - -
Accr13g00909 671 CDD TM_EGFR-like 276 313 - -
Accr13g00909 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 105 651 - -
Accr13g00909 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 432 634 - -
Accr13g00909 671 Gene3D Hepatocyte Growth Factor 182 264 - -
Accr13g00909 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Accr13g00909 671 ProSiteProfiles PAN/Apple domain profile. 182 266 IPR003609 -
Accr13g00909 671 SMART ntp_6 185 264 IPR003609 -
Accr13g00909 671 ProSiteProfiles Protein kinase domain profile. 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00909 671 Gene3D Transferase(Phosphotransferase) domain 1 432 631 - -
Accr13g00909 671 Pfam S-locus glycoprotein domain 52 161 IPR000858 GO:0048544
Accr13g00909 671 Pfam Domain of unknown function (DUF3403) 628 671 IPR021820 GO:0004674
Accr13g00909 671 CDD PAN_AP_plant 181 265 - -
Accr13g00909 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 321 431 - -
Accr13g00909 671 MobiDBLite consensus disorder prediction 648 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00909 Accr-Chr13 10494618 10497322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00909 270 641 Receptor kinase-like Gene Family AT4G23190 48.303 2.30e-122 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00909 PK_Tyr_Ser-Thr 9.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00909 - - pcin:129322539 1017.3