Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00908 ATGTTGAGCATAAACACAGAGGGACATCTTGTACTTCTAAGCCATGATGAGACTGTTGTTTGGTCAGCAAATTCCACCATAAAGGCCTTGAGTCCAATTGTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGAGATGGGAAGGATCAAAAGCCCCAAAACTACTTGTGGCAAAGCTTTGACCATCCTTCTGATACGATTTTGCCGGGAATGAAGTTTGGATGGGACCTGAGAACTGGTCTTAATCGACGTTATACAGCATGGAAGAATTGGGACGACCCTTCTTATGGAGACTTTTCAGCGGAGCTTGTACCACACAATTATCCTGATATAGTAGGCTGGCTGGGCCGAACAGAGTATATGAGGAGTGGCCCTTGGAATGGAGTCCGGTACAGTGGCGCCTCTCATGCGACGAGCAATCCACTATATAAAATAAAGTTTGTCCGGAATAAAGATGAGGTTTATTCAGAACATACTCTCATAAATGAGTCACTGATTGCAAGGTTTGTCTTCAACCAAACATTATACTCACTACTGGACATATTATGGAGTGAAAATGATCAAAGGTGGATGACTTATAGTTTTGCGCCAATGGATAATTGTGATAGATATAATCGTTGTGGTCCTAATGGAAACTGCGTCCTGGGTGAGACACCAATATGCCAGTGCTTGCCAGGATTCTTGCCAAAATCACCCAGAAATTGGAACGTTTTGGACTGGGCTGAAGGATGCATCCGCAATAAATCCTGGAGTTGCAAGGGAAAAAACAGTGATTATTTTGTCAAATTTAGTGGGCTGAAACTTCCAGATACAACATACTCTTGGGTTAATACAAGTATGACACTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATTCTAATTCAGATATCAGGGAAGGAGGTAGTGGTTGTGTTTTGTGGTTTAGTGATTTAGTTGATATAAGGCAGCTTCCCTTTAATGACCAGCATATTTATATTCGCCTTGCTTCTCCAGAAACAGCTGAACACGATGAAGCTAACGGAAATAAGACAAAGGTGATTGCTGCAACAGTGACCACTGTATTGGCTGTTGTGATGCTTCTCACTGTGTTTTACATTTACATACGCAGAAGAAACTCTATAGCAAATAAGGAAGAAGGTTCTGATGGAAATATGGAGCTAAAAACCTTGATAGCAGGAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCAACGAATTTATGACCTTGCAGTTATAGTAAATGCTACTAATAACTTCTCATTAGAAAACAAGCTTGGCGAAGGTGGTTTTGGTCCTGTATATAGGGGTATGCTCGTGGATGGACAAGAAATTGCGGTGAAACGGCTTTCACAAAGTTCTTCCCAAGGGCTAAGTGAATTTAAGAATGAAGTCAGATTATGTGCCAGGCTTCAACATCGTAATCTTGTTAAGGTTCATGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTCATTTATGAGTACATGCGCAACAAGAGCCTAGATTCGTTTATTTTTGGTTCTGAAAGTAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATCCGTGGAATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTAGATTAAAAATTGTCCATAGAGACCTCAAAGCAAGTAATATATTATTGGATGATGAATTAAATCCAAAAATATCAGATTTCGGTTTGGCAAGAATATTTGGTGGAGATCAAAATGAAGATAAAACAAAGCAAATAATTGGCACATTTGGATATATGGCTCCTGAATACGCAATTCATGGACTCTTCTCTGTCAAATCTGATGTGTTTAGTTTTGGAGTATTGCTGCTAGAAATAGTGAGTGGAAAGAAAAACAGGGGGCCCATCTTGCCAAGCCGAAGCGTTAATCTTATCGGACATGCATGGAGGTTGTGGAATGAGGGAGTCCCACTAAAATTAGCCAATGAACATTTGGAGAGGTCTTACATTGAATCAGAAGTATTGCGATGCATTCACATTGGTCTTCTTTGTTTGCAATACCATGCTGATGATAGGCCAGACATGACATCTGTGGTTATAATGTTGAACAGTGAAGGTGTGTTGCCTGAGCCTAAAGAACCTGGTTTCCTTTTGGAAAACATCCTAGTTAGGGGAGAATCTTCTAACAATAATACAACTCCATCGAGTAATGAAGTATCTATCACTTTGTTAGAAGCCAGGTAA 2226 0.4021 MLSINTEGHLVLLSHDETVVWSANSTIKALSPIVQLLGSGNLVLRDGKDQKPQNYLWQSFDHPSDTILPGMKFGWDLRTGLNRRYTAWKNWDDPSYGDFSAELVPHNYPDIVGWLGRTEYMRSGPWNGVRYSGASHATSNPLYKIKFVRNKDEVYSEHTLINESLIARFVFNQTLYSLLDILWSENDQRWMTYSFAPMDNCDRYNRCGPNGNCVLGETPICQCLPGFLPKSPRNWNVLDWAEGCIRNKSWSCKGKNSDYFVKFSGLKLPDTTYSWVNTSMTLEECKAKCWENCSCNAYSNSDIREGGSGCVLWFSDLVDIRQLPFNDQHIYIRLASPETAEHDEANGNKTKVIAATVTTVLAVVMLLTVFYIYIRRRNSIANKEEGSDGNMELKTLIAGNNEEGYEGNMEQRIYDLAVIVNATNNFSLENKLGEGGFGPVYRGMLVDGQEIAVKRLSQSSSQGLSEFKNEVRLCARLQHRNLVKVHGCCIQGEEKMLIYEYMRNKSLDSFIFGSESKLLDWSKRFHIIRGIARGLMYLHQDSRLKIVHRDLKASNILLDDELNPKISDFGLARIFGGDQNEDKTKQIIGTFGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGKKNRGPILPSRSVNLIGHAWRLWNEGVPLKLANEHLERSYIESEVLRCIHIGLLCLQYHADDRPDMTSVVIMLNSEGVLPEPKEPGFLLENILVRGESSNNNTTPSSNEVSITLLEAR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00908 741 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 94 IPR036426 -
Accr13g00908 741 Pfam S-locus glycoprotein domain 122 231 IPR000858 GO:0048544
Accr13g00908 741 ProSiteProfiles EGF-like domain profile. 197 233 IPR000742 -
Accr13g00908 741 Gene3D Hepatocyte Growth Factor 252 334 - -
Accr13g00908 741 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 251 334 - -
Accr13g00908 741 ProSiteProfiles Bulb-type lectin domain profile. 1 57 IPR001480 -
Accr13g00908 741 CDD EGF_CA 199 227 - -
Accr13g00908 741 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 687 - -
Accr13g00908 741 SMART ntp_6 255 334 IPR003609 -
Accr13g00908 741 Pfam Domain of unknown function (DUF3403) 698 741 IPR021820 GO:0004674
Accr13g00908 741 Pfam Protein tyrosine and serine/threonine kinase 427 692 IPR001245 GO:0004672|GO:0006468
Accr13g00908 741 CDD PAN_AP_plant 251 335 - -
Accr13g00908 741 Gene3D Phosphorylase Kinase; domain 1 394 501 - -
Accr13g00908 741 ProSiteProfiles Protein kinase domain profile. 426 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00908 741 Gene3D - 1 60 IPR036426 -
Accr13g00908 741 MobiDBLite consensus disorder prediction 721 741 - -
Accr13g00908 741 Gene3D Transferase(Phosphotransferase) domain 1 502 701 - -
Accr13g00908 741 CDD STKc_IRAK 432 697 - -
Accr13g00908 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Accr13g00908 741 Pfam PAN-like domain 252 320 IPR003609 -
Accr13g00908 741 ProSiteProfiles PAN/Apple domain profile. 252 336 IPR003609 -
Accr13g00908 741 Pfam D-mannose binding lectin 2 89 IPR001480 -
Accr13g00908 741 SUPERFAMILY Protein kinase-like (PK-like) 410 700 IPR011009 -
Accr13g00908 741 CDD TM_EGFR-like 346 383 - -
Accr13g00908 741 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 391 501 - -
Accr13g00908 741 PIRSF SRK 1 741 IPR024171 GO:0004674
Accr13g00908 741 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 502 704 - -
Accr13g00908 741 SMART serkin_6 426 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00908 Accr-Chr13 10474841 10497532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00908 340 711 Receptor kinase-like Gene Family AT4G23190 48.825 7.37e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00908 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00908 - - pcin:129322539 1018.45