Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00905 ATGGCCAATCTTCTTCCTCTCATTCTCTCTTTCTTCTTCACTTCATTATTTTCACTTTCTTCTGCAACTGATACTCTCACAAAGTCTCATTCACTTGTTGATGAACCAAACGGAACCACCACCACCACCACCACCACGTTGGTGTCCAACGACGGAACCTTCGAACTTGGTTTCTTCTCTCCAGGCTCTTCCTCAAACCGCTACCTCGGCATCTGGTACAGAAACATCCCCGATACGACCGTCGTTTGGGTGGCCAACCGCCAACCGCCCCTAAAAGACGACGCCAACTTCACAACTCCGAGTCGTTTGACCATAAACGACGAGGGAAGTCTCGTGCTCCTCAGCCCAAACGGCACCGTCATTTGGTCGCCGAACACGACGGTGAAAAGTCAAAGTGTAAGTGTTGTTGCGCAGCTATTGGATTCAGGGAACTTGGTTCTGAGAAATGAAAAGGACCAGGTTGGTGGTGATGAGAAGTATATATGGCAGAGTTTTGATTATCCGAGTGATACGTTCTTGCCTGGAATGAAGATTGGGTGGGATCTGAGAAGAGGGATTAACAGGGAATTGAGGGCGTGGAAGAGTTGGGACGATCCTTCCGTCGGAGAATTGAGATGGGGTATGGTGGTCGGAGTGACGCCAGAGCTGGTGATGTGGAAGGGAGAAGAAGAGTATTATAGAAGCGGTCCTTGGAATGGACTTATTTTCAGTGGCAAAACTACACCAATCTTTGACCTTCACTTTGTCTCTAATCAAGATGAGTTGGTTTACACTTCCCAGCTCCAGAACAAATCGGTGATAACAAGGGTTGTATTGAACGGAACTACCTCATACCGTCAGCGCTATAACTGGGTTGAGGAAACTAAAAGCTGGAGGCTTTATTCGTCTGTGCCCAGAGATAATTGCGACAACTACAATCTCTGTGGCCCCTATGGAAATTGTGTTGTTAATGACTCTCCTCCCTGCCAGTGTCTCTCAGGGTTTGAGCCAAAATCACCCCAAAACTACAATGCTTTGGACTGGACCCAGGGATGTGTTCGCAGTGAAATGTGGAGCTGTGGGGTCAAAAATAGAGATGGGTTTCGAAGATTCGGTGGGTTGAAAATGCCCGATACTAGAAAAGCTTGGGTTAATTCAAGCATGACACTTGAGGATTGCAGGATGAAATGCTTGGCAAATTGCTCTTGTACTGCTTATGCGAACTTGTATGTTACTGGGGGAGGTATTGGGTGTTTGATTTGGTTTGGTGAGCTTATTGATCTGAGAGTGGCTTCCACTCCTGGGCAAGATCTATATATCCGAATGGCTACCTCTGAGACTGATGCGAAAAGGCACAAGAAAATGGTGGGGATTGTGGTGATAGCCGTTGCAGTTCCATTGGCTGTTCTGGCACTTTTGGCCTTTGCTTGCACTCATTGGAGGAAAAGAAAGCGTAGAGTCGATACAGAGAAAACCTCCATAGAGAACAACAATAAAGATGAACAAGAGGACTTAGACCTTCCGTTATACGACCTTGCTACAATTGTTCATGCCACTAATGACTTCTCAAATGACCTGAAGCTTGGCCAAGGAGGTTTTGGACCAGTATACAAGGGTATTTTAGCAGATGGGCAAGAGATTGCTATCAAGAGGCTATCACGGAGTTCTGGACAAGGAATAAAAGAATTTAAGAATGAAGTGTCATTGTGTGCGAAACTTCAGCACCGAAATCTTGTGAAGGTTCTTGGTTGTTGCACCCAAGGAGAAGAGAAGATGCTCATCTATGAATACATGCCTAACAAAAGCCTAGATAGCTTTTTATTTGATTCTAGGCAGAATGAATTCCTAGACTGGACAAGGCGCTTTCATATCATATTTGGAATTGCTCGAGGGCTTCTTTATCTTCATCAAGATTCTAGGTTACGGATCATACATAGAGATCTTAAAGCAAGTAATATTTTGTTAGATGCAGAGATGAACCCAAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGGGATCAAATTGAAGGGAATACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCCATTCATGGGCTATTCTCCATTAAATCTGATGTATTTAGCTTTGGTGTGTTACTATTGGAAATAGTAAGTGGAAAGAAAAACCGAGGAGCTTCATATCCAAACCAGGGTTTTAACCTTATTGGACAAGCATGGAGATTGTGGAAGGAGAACCACCCATTGGAATTGGTTGATGGCTGTTTGGGGGAAGCTTTTAACATATCAGGAGCGTTGCGTTGTATTCAGGTTGGTCTTCTTTGTGTGCAAGTTCATCCTGAGGATAGGCCAAACATGGCCTCAGTAATTGTGATGTTGAGCAGTGAGAATGTGTTGCCTGAGCCTAAGGAGCCTGGTTTCTTGATAGAGAAGATTATGGTGGGAGAAGAATGTGCTTCTTCTGGCCACCAGATATCTTCTTCAACTAATGAAGTAACTGTTACTCAGTTAGAGGCCAGATAA 2502 0.4428 MANLLPLILSFFFTSLFSLSSATDTLTKSHSLVDEPNGTTTTTTTTLVSNDGTFELGFFSPGSSSNRYLGIWYRNIPDTTVVWVANRQPPLKDDANFTTPSRLTINDEGSLVLLSPNGTVIWSPNTTVKSQSVSVVAQLLDSGNLVLRNEKDQVGGDEKYIWQSFDYPSDTFLPGMKIGWDLRRGINRELRAWKSWDDPSVGELRWGMVVGVTPELVMWKGEEEYYRSGPWNGLIFSGKTTPIFDLHFVSNQDELVYTSQLQNKSVITRVVLNGTTSYRQRYNWVEETKSWRLYSSVPRDNCDNYNLCGPYGNCVVNDSPPCQCLSGFEPKSPQNYNALDWTQGCVRSEMWSCGVKNRDGFRRFGGLKMPDTRKAWVNSSMTLEDCRMKCLANCSCTAYANLYVTGGGIGCLIWFGELIDLRVASTPGQDLYIRMATSETDAKRHKKMVGIVVIAVAVPLAVLALLAFACTHWRKRKRRVDTEKTSIENNNKDEQEDLDLPLYDLATIVHATNDFSNDLKLGQGGFGPVYKGILADGQEIAIKRLSRSSGQGIKEFKNEVSLCAKLQHRNLVKVLGCCTQGEEKMLIYEYMPNKSLDSFLFDSRQNEFLDWTRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDAEMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGLFSIKSDVFSFGVLLLEIVSGKKNRGASYPNQGFNLIGQAWRLWKENHPLELVDGCLGEAFNISGALRCIQVGLLCVQVHPEDRPNMASVIVMLSSENVLPEPKEPGFLIEKIMVGEECASSGHQISSSTNEVTVTQLEAR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00905 833 Pfam PAN-like domain 353 421 IPR003609 -
Accr13g00905 833 Gene3D - 34 165 IPR036426 -
Accr13g00905 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 199 IPR036426 -
Accr13g00905 833 Pfam Domain of unknown function (DUF3403) 787 833 IPR021820 GO:0004674
Accr13g00905 833 SMART blect_4 38 168 IPR001480 -
Accr13g00905 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 794 - -
Accr13g00905 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Accr13g00905 833 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00905 833 Gene3D Phosphorylase Kinase; domain 1 473 590 - -
Accr13g00905 833 CDD PAN_AP_plant 352 436 - -
Accr13g00905 833 CDD STKc_IRAK 521 786 - -
Accr13g00905 833 Pfam Protein tyrosine and serine/threonine kinase 519 782 IPR001245 GO:0004672|GO:0006468
Accr13g00905 833 SUPERFAMILY Protein kinase-like (PK-like) 501 798 IPR011009 -
Accr13g00905 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 590 - -
Accr13g00905 833 Gene3D Transferase(Phosphotransferase) domain 1 591 794 - -
Accr13g00905 833 ProSiteProfiles Bulb-type lectin domain profile. 32 160 IPR001480 -
Accr13g00905 833 SMART ntp_6 356 435 IPR003609 -
Accr13g00905 833 CDD B_lectin 47 168 IPR001480 -
Accr13g00905 833 ProSiteProfiles EGF-like domain profile. 298 334 IPR000742 -
Accr13g00905 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 777 - -
Accr13g00905 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 165 - -
Accr13g00905 833 Pfam S-locus glycoprotein domain 226 332 IPR000858 GO:0048544
Accr13g00905 833 Pfam D-mannose binding lectin 80 194 IPR001480 -
Accr13g00905 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Accr13g00905 833 SMART serkin_6 515 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00905 833 ProSiteProfiles PAN/Apple domain profile. 353 436 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00905 Accr-Chr13 10444104 10449069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00905 452 801 Receptor kinase-like Gene Family AT4G23190 56.145 2.49e-132 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00905 PK_Tyr_Ser-Thr 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00905 - - gmx:100790436 1005.36