Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00904 ATGGAGAACAATAATAGCTTGGTTTTGTTGTTTGATTCTGCTGAATCATTTATTACCTGTGATTTCTCAGTTCCTGGTCAAATTTGGCAACTGTTCTCTTTCTCCCCACCATTAGTTTTGCTGCCTGAGGAAAGCCAAAGAGATACCAGCTTTGACAATTTAACTTTCCCATATTCCAACTCCTATGTATATTTTCCTTGGTTCATTGAGAGATCTAGAAACCAACCCAAAGGAATGGCCATTTTTTCTCTTATAATTGCTGTTATAAAAGTGCTCTTGATATTCCCTCCCTCTTCTTCTGCATCTGATGTTATTACCCATGATCATCCACTGCCTGATGGAAGGACCTTGGTTTCTAAAGATGGGATCTTTGAACTGGGCTTCTTCAGCCCAGGTAGTTCCACAAACCGTTATGTTGGAATATGGTACAAGAGCATCTCACAGAAAACTGTTGTTTGGGTGGCCAACCGTGAAAAACCAGTTAAATATAACTCAAGTGTGTTGAGCATAAACACAGAGGGACGTCTTGTGCTTCTCAGCCAGAACCAGACTATTGTTTGGTCAGCAAACTCAACAACACAAGGCCTGAATCCCATTGCGCAGCTTCTAGACTCTGGAAACCTTGTACTGAGAAATGAACAAGACCAGAATCCTCAAAACTACCTTTGGCAGAGTTTTGATTATCCATCTGATACATTTTTACCAGGAATGAAGATTGGGTGGGACCTGAAAACTGGGCTAAATCGACGCCTAATAGCATGGAGGAACTGGGATGACCCATCTCCTGGAGACTTCACTTGTGGTATTGCACTTCGTGCTACTCCTGAGCTAGTAATGTGGAAGGGCTCAGAAGAAATCCATAGAAGTAGCCCTTGGAACGGAGTCTGGATTGGTGCTAAACCCACTCCACTTTTCCAGCTGCAATTTGTTGTCAATGAAGATGAGGTGGTTTACACTTCTAATCTCCTGGACAAATCTGTGACTACAAGAGTTGTTCTAAACCAAACTGTTTATTCTCGTCAGCGTTACATCTGGGTTGAACAGACCAAAAGTTGGATGATTTATTCATCTGTACCAAATGATAAATGTGACCGTTATAATTCTTGTGGCCCCAATGGAAATTGTATTGCGAGTGAGTCACCACGTTGCCAGTGTTTAACAGGATTCAAGCCAAAATCACCTCAAAAATATGATGCATTGGACTGGACTCAGGGATGTGTGCGCACTGAACCATGGCACTGCAGGGTCAAAGATAAAGATGGTTTTAAAAAATTTAGTGGTTTAAAATTGCCAGATACAAGAACATCTTGGGTTAATGCAAGTATGACACTTTGGGAGTGCAAGGCTAAATGCTGGGAAAATTGTTCCTGCAACGCTTATGCAAACTTATACATTACTGGAGGAGGTAGTGGTTGTATCCTTTGGTTTGGTCATCTTATTGACTTGAGAGTGGTTACAGTCCCTGGGCAAGATCTTTTTATTCGAATGGCTTATTCTGATATTGTACTAGAAGATGCAGAAAAGCATAAGAAAAAGGTGGTTGTGGTGGTAACAACAGTTACTTTTGCCCTGGTTCTCTTGATGCTTTTGACTTTCTTTTCCATTCATAGGAGGAATAGAAAACGAAGAGAGAAAATTTTGACCGAGGATGGTCATGAAGGAGAGCAAAAAGACATAGAGCTGCCTCTCTTTGACATTGCTACAATTATTCGTGCCACTAACGATTTCTCAAGTGATAAGAAGCTTGGCCAAGGTGGTTTTGGACCTGTATACAGGGGTACACTTGAAGATGGGCAAGAGATTGCTGTCAAAAGGTTATCAGAGGGATCTAGACAAGGATTGAAGGAATTTAAAAATGAAGTGATAATGTGTGCAAAACTTCAACATCGGAATCTTGTTAAGGTTCTTGGCTGTTGCATTGAAAGAGGGGAGAAAATGCTCATCTATGAATACATGCCCAAGAAAAGTTTAGATTCCATTCTTTTTGATTTTTGCCAAAGTGAATCTCTGAATTGGCCACAGCGCTTTCACATTATTTTTGGAATTGCTCGGGGGCTTGTCTATCTTCATCAAGATTCTCGATTAAGGATCATACATAGAGATCTTAAAGCAAGCAACATTTTGTTAGATAAGGATTTAAATCCGAAAATTTCAGATTTTGGCATTGCAAGAATGTTTGGAGCAGACCAAATGGAAGGAAATACAAAGAAAGTGATCGGTACATATGGTTATATGGCACCAGAATATGCCGTCTATGGGATATTTTCAATAAAATCTGATGTGTTCAGCTTCGGCATATTACTTCTAGAAATAATAAGTGGAAAGAGAAACCGAGGGGCTTCCTATCCAAACTATGGTTTTAACCTTATCAGCCATGCTTGGAGACTATGGAAGGAGGGTAACACAAAAGAACTGATAGATGCTTGTTTGGGGGACAGTTTTAATTTATCAGAATTATTAAGGTGCATCCATGTGGCTCTTCTGTGTGTACAGCTGCGTCCTGATGATAGGCCAAACATGGCATTAGTATTAGTAATGTTGAGCAGTGAGAATGCCTTGCCGGAGCCAAAGGAGCCTGGTTTCTTATTAGAAGGACCTTCAGCTAAAGGAGAGTATTATTCAAGCAATGAAATAACTTTGACTCTGCTACAGGCCAGATAG 2661 0.4047 MENNNSLVLLFDSAESFITCDFSVPGQIWQLFSFSPPLVLLPEESQRDTSFDNLTFPYSNSYVYFPWFIERSRNQPKGMAIFSLIIAVIKVLLIFPPSSSASDVITHDHPLPDGRTLVSKDGIFELGFFSPGSSTNRYVGIWYKSISQKTVVWVANREKPVKYNSSVLSINTEGRLVLLSQNQTIVWSANSTTQGLNPIAQLLDSGNLVLRNEQDQNPQNYLWQSFDYPSDTFLPGMKIGWDLKTGLNRRLIAWRNWDDPSPGDFTCGIALRATPELVMWKGSEEIHRSSPWNGVWIGAKPTPLFQLQFVVNEDEVVYTSNLLDKSVTTRVVLNQTVYSRQRYIWVEQTKSWMIYSSVPNDKCDRYNSCGPNGNCIASESPRCQCLTGFKPKSPQKYDALDWTQGCVRTEPWHCRVKDKDGFKKFSGLKLPDTRTSWVNASMTLWECKAKCWENCSCNAYANLYITGGGSGCILWFGHLIDLRVVTVPGQDLFIRMAYSDIVLEDAEKHKKKVVVVVTTVTFALVLLMLLTFFSIHRRNRKRREKILTEDGHEGEQKDIELPLFDIATIIRATNDFSSDKKLGQGGFGPVYRGTLEDGQEIAVKRLSEGSRQGLKEFKNEVIMCAKLQHRNLVKVLGCCIERGEKMLIYEYMPKKSLDSILFDFCQSESLNWPQRFHIIFGIARGLVYLHQDSRLRIIHRDLKASNILLDKDLNPKISDFGIARMFGADQMEGNTKKVIGTYGYMAPEYAVYGIFSIKSDVFSFGILLLEIISGKRNRGASYPNYGFNLISHAWRLWKEGNTKELIDACLGDSFNLSELLRCIHVALLCVQLRPDDRPNMALVLVMLSSENALPEPKEPGFLLEGPSAKGEYYSSNEITLTLLQAR 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00904 886 CDD PAN_AP_plant 417 497 - -
Accr13g00904 886 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 539 651 - -
Accr13g00904 886 SMART blect_4 108 229 IPR001480 -
Accr13g00904 886 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 652 855 - -
Accr13g00904 886 Pfam D-mannose binding lectin 150 255 IPR001480 -
Accr13g00904 886 CDD STKc_IRAK 582 847 - -
Accr13g00904 886 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 98 226 - -
Accr13g00904 886 CDD B_lectin 108 229 IPR001480 -
Accr13g00904 886 Gene3D Transferase(Phosphotransferase) domain 1 652 856 - -
Accr13g00904 886 ProSiteProfiles Protein kinase domain profile. 576 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00904 886 Gene3D - 98 226 IPR036426 -
Accr13g00904 886 Pfam S-locus glycoprotein domain 288 393 IPR000858 GO:0048544
Accr13g00904 886 ProSiteProfiles Bulb-type lectin domain profile. 102 223 IPR001480 -
Accr13g00904 886 PIRSF SRK 75 886 IPR024171 GO:0004674
Accr13g00904 886 Pfam Protein tyrosine and serine/threonine kinase 578 782 IPR001245 GO:0004672|GO:0006468
Accr13g00904 886 ProSiteProfiles PAN/Apple domain profile. 414 497 IPR003609 -
Accr13g00904 886 SMART serkin_6 576 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00904 886 Gene3D Phosphorylase Kinase; domain 1 536 651 - -
Accr13g00904 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Accr13g00904 886 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 91 834 - -
Accr13g00904 886 Pfam PAN-like domain 414 482 IPR003609 -
Accr13g00904 886 SUPERFAMILY Protein kinase-like (PK-like) 560 847 IPR011009 -
Accr13g00904 886 ProSiteProfiles EGF-like domain profile. 359 395 IPR000742 -
Accr13g00904 886 SUPERFAMILY alpha-D-mannose-specific plant lectins 151 260 IPR036426 -
Accr13g00904 886 SMART ntp_6 417 496 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00904 Accr-Chr13 10426832 10430848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00904 513 861 Receptor kinase-like Gene Family AT4G23230 51.714 2.13e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00904 PK_Tyr_Ser-Thr 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00904 - - gmx:100790436 1008.82