Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00903 ATGGACACTTTCTGTTTCATGAACATCGTTGCTTATGCTCTTCTTATCTCTGGTTTCAAAGCTTCCATGGCAGTTAGTTCTATTGGTCAGTCCCAAATCCTCAGTGACGCCTCAAGGACAACCTTAACTTCCAAAGGTGGAAACTTTGACCTAGGTTTCTTCACCCCAGGAAACTCCGACAAACGCTACTTAGGAATTTGGTACAAGAAAATCCCAGAAAGAGTTGTCTGGGTAGCAAATAGCGTCAACCCAACTAACGATTCCAGCGGGGTATTAACGGTCAACGCCGCCGGCAACCTCGTCCTCACACAGAACAATACCGTCGTTTGGCACACGAATTTAACAAGGCAGGCTCAGAATCCTGTTGCAGAGCTCTTAGATTCTGGAAATTTTGTAGTGAGAGATGTAAATGAAGCAAACCCAGAAGCTTACTTGTGGCAAAGTTTTGATTTTCCTTCTGATACATCACTTCCTGGTATGAAGCTAGGATGGGACCTGAAAACTCGTCTGAACAGAAAAATTACAGCTTGGAATAGCCCAGACGATCCAACCCCTAGTGGGTTTTCTTGGGAATTATTGCTTCATAACTATCCTGAGTTTTTCCTCATGAAGGGTTCAAAGAAGTTCATGAGAATTGGACCTTGGAATGGTTTATATTTCAGTGGCATACCAGATTTAAAGCCAAACCCTATTTATAATTTCAACTTTATATCTACTTCGGACGAGGTTTATTTTACCTTTAGCCTTAATAACACTTCTGTGATCTCAATACTGGCGGTGAACCAAACCACTTCTCAGGCAAATCGTTATGTGTGGGTTGAAGCAGATCAAAATTGGTTGATTTATCAGACTCTACCTAAGGATTATTGTGATAATTATAACCTATGTGGACCAAATGGGAATTGCATTATCAGTGACTCACCTGTTTGCCAATGCTTGAAAGGGTTCAAGCCTAAGATACCACAGGCTTGGAACACAATGGATTGGTCAGGTGGGTGTGTGAGAAATGAAGCATTGAACTGTAATAACGGAAGCAAGGATGGGTTTATCGGATTGACTGGCTTGAAAGTTCCAGAAACTGAGCACACTTGGATAGATCAGAGTATGAGTCTAGAAAGATGCAGAGACAAATGTCTGAGTAATTGTTCTTGCATGGCCTATACAAGCTCAAATATAGCAGGAGCTGAACTTGGTTGTGTTATGTGGTTTGGAGATTTAATTGATATCAGACACTTTCCTTATGATGGGCAGGAACTGTATATTCGAATGGCGGCTTCGGAGCTAGGGAAAGAACGTCAGAGCAAGAAGAAGCTGACAATAACAATTGTCTCAACCTTGGGTGCAATTTCCGTAGTGCTTTTACTGGGCTTTTGTTATTATATCTACCAAGACCAGAGAAAGAGGAAGATGACTGATAATCCAAATGACAATGAAGGAGATCAAAACAGGGGAGAAAGTGTAGATGATCTGGATCTCCCACTGCTTGACTTTTCAACAATAGTTGTTGCCACTGATAACTTCTCATTAGAGAACAAGATTGGAGAAGGAGGTTTTGGACCTGTATATTGGGGGAAATTAGCACATGGGCAAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAATGACTGAGTTCAAGAATGAAGTAAAATTGATTGCGAAACTCCAGCACCGAAATCTTGTAAAACTTCTTAGTTGTTGCATCCAAGGAGATAACAAAATGCTGGTGTATGAATACATGCCTAATTCCAGCTTGGATTGTTTCATTTTTGATGATACTAAGAGTAAGTACCTAGATTGGCCTAAACGATTCCACATTATTTGTGGAATTGCTCGGGGTCTTGTTTATCTACATCAAGATTCTAGATTGAGGATTATTCATCGAGATCTCAAACCAAGTAATGTTTTACTCGATGACAAGTTAAACCCAAAGATATCAGATTTTGGCATAGCTAGAATATTTGGAGGAGACCAAGTTGAAGGAAACACAAAACGAGTAGTTGGCACTTATGGATATATGGCACCAGAATATGCAGCCGATGGCCTTTTCTCCGTGAAGTCAGATGTTTTCAGTTTCGGTATATTGTTATTAGAGATCATAAGTGGGAAGAAAAGTAGAGGCTTTTATCATAAAGACCGCTCCAATAACCTGATTGGCCATGCTTGGAATTTGTGGAAAGAAGGGAGTGCAACAGAAATAATAGACACAAACTTAGTGGAATCATGCAATTTATCAAAAGTACTACGTTGTATTCACGTTGGACTCTTGTGTGTCCAACAATACCCAGAGGATAGGCCTACCATGCCCTCTGTGGTTTTAATGTTAGGAAGTGAAACTGAATTGGCTCAACCTAAAGTGCCTGGTTTTTATGCAGAGAAAGATTTCATTGAAACCAATTCACATACAAGTCAAATGGAAGTTAGCTCCAACAGTGAACTAACAATTACCTTATTAGAAGCTCGATGA 2475 0.404 MDTFCFMNIVAYALLISGFKASMAVSSIGQSQILSDASRTTLTSKGGNFDLGFFTPGNSDKRYLGIWYKKIPERVVWVANSVNPTNDSSGVLTVNAAGNLVLTQNNTVVWHTNLTRQAQNPVAELLDSGNFVVRDVNEANPEAYLWQSFDFPSDTSLPGMKLGWDLKTRLNRKITAWNSPDDPTPSGFSWELLLHNYPEFFLMKGSKKFMRIGPWNGLYFSGIPDLKPNPIYNFNFISTSDEVYFTFSLNNTSVISILAVNQTTSQANRYVWVEADQNWLIYQTLPKDYCDNYNLCGPNGNCIISDSPVCQCLKGFKPKIPQAWNTMDWSGGCVRNEALNCNNGSKDGFIGLTGLKVPETEHTWIDQSMSLERCRDKCLSNCSCMAYTSSNIAGAELGCVMWFGDLIDIRHFPYDGQELYIRMAASELGKERQSKKKLTITIVSTLGAISVVLLLGFCYYIYQDQRKRKMTDNPNDNEGDQNRGESVDDLDLPLLDFSTIVVATDNFSLENKIGEGGFGPVYWGKLAHGQEIAVKRLSGSSRQGMTEFKNEVKLIAKLQHRNLVKLLSCCIQGDNKMLVYEYMPNSSLDCFIFDDTKSKYLDWPKRFHIICGIARGLVYLHQDSRLRIIHRDLKPSNVLLDDKLNPKISDFGIARIFGGDQVEGNTKRVVGTYGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKKSRGFYHKDRSNNLIGHAWNLWKEGSATEIIDTNLVESCNLSKVLRCIHVGLLCVQQYPEDRPTMPSVVLMLGSETELAQPKVPGFYAEKDFIETNSHTSQMEVSSNSELTITLLEAR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00903 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Accr13g00903 824 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Accr13g00903 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
Accr13g00903 824 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Accr13g00903 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Accr13g00903 824 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Accr13g00903 824 SMART blect_4 31 152 IPR001480 -
Accr13g00903 824 SMART serkin_6 507 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00903 824 Gene3D Phosphorylase Kinase; domain 1 472 582 - -
Accr13g00903 824 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Accr13g00903 824 Gene3D - 22 149 IPR036426 -
Accr13g00903 824 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 769 - -
Accr13g00903 824 Pfam PAN-like domain 341 409 IPR003609 -
Accr13g00903 824 Pfam D-mannose binding lectin 75 177 IPR001480 -
Accr13g00903 824 Pfam Protein tyrosine and serine/threonine kinase 508 775 IPR001245 GO:0004672|GO:0006468
Accr13g00903 824 CDD B_lectin 31 152 IPR001480 -
Accr13g00903 824 Gene3D Transferase(Phosphotransferase) domain 1 583 790 - -
Accr13g00903 824 SMART ntp_6 344 423 IPR003609 -
Accr13g00903 824 PIRSF SRK 1 824 IPR024171 GO:0004674
Accr13g00903 824 FunFam receptor-like serine/threonine-protein kinase SD1-8 478 582 - -
Accr13g00903 824 CDD PAN_AP_plant 339 424 - -
Accr13g00903 824 CDD STKc_IRAK 513 778 - -
Accr13g00903 824 ProSiteProfiles Protein kinase domain profile. 507 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00903 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 183 IPR036426 -
Accr13g00903 824 SUPERFAMILY Protein kinase-like (PK-like) 492 778 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00903 Accr-Chr13 10418209 10421699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00903 438 792 Receptor kinase-like Gene Family AT4G23230 53.933 4.14e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00903 PK_Tyr_Ser-Thr 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00903 - - gmx:100775648 1095.49