Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00902 ATGATGCAGCCAAAGAACCACAAAGTTCAACCAATGGACACTTTCTGTTTCATGAACATCGTTGCTTATGCTCTTCTTATCTCTGGTTTCAAAGCTTCCATGGCAGTTAGTTCTATTGGTCAGTCCCAAATCCTCAGTGACGCCTCAAGGACAACCTTAACTTCCAAAGGTGGAAACTTTGACCTAGGTTTCTTCACCCCAGGAAACTCCGACAAACGCTACTTAGGAATTTGGTACAAGAAAATCCCAGAAAGAGTTGTCTGGGTAGCAAATAGCGTCAACCCAACTAACGATTCCAGCGGGGTATTAACGGTCAACGCCGCCGGCAACCTCGTCCTCACACAGAACAATACCGTCGTTTGGCACACGAATTTAACAAGGCAGGCTCAGAATCCTGTTGCAGAGCTCTTAGATTCTGGAAATTTTGTAGTGAGAGATGTAAATGAAGCAAACCCAGAAGCTTACTTGTGGCAAAGTTTTGATTTTCCTTCTGATACATCACTTCCTGGTATGAAGCTAGGATGGGACCTGAAAACTCGTCTGAACAGAAAAATTACAGCTTGGAATAGCCCAGACGATCCAACCCCTAGTGGGTTTTCTTGGGAATTATTGCTTCATAACTATCCTGAGTTTTTCCTCATGAAGGGTTCAAAGAAGTTCATGAGAATTGGACCTTGGAATGGTTTATATTTCAGTGGCATACCAGATTTAAAGCCAAACCCTATTTATAATTTCAACTTTATATCTACTTCGGACGAGGTTTATTTTACCTTTAGCCTTAATAACACTTCTGTGATCTCAATACTGGCGGTGAACCAAACCACTTCTCAGGCAAATCGTTATGTGTGGGTTGAAGCAGATCAAAATTGGTTGATTTATCAGACTCTACCTAAGGATTATTGTGATAATTATAACCTATGTGGACCAAATGGGAATTGCATTATCAGTGACTCACCTGTTTGCCAATGCTTGAAAGGGTTCAAGCCTAAGATACCACAGGCTTGGAACACAATGGATTGGTCAGGTGGGTGTGTGAGAAATGAAGCATTGAACTGTAATAACGGAAGCAAGGATGGGTTTATCGGATTGACTGGCTTGAAAGTTCCAGAAACTGAGCACACTTGGATAGATCAGAGTATGAGTCTAGAAAGATGCAGAGACAAATGTCTGAGTAATTGTTCTTGCATGGCCTATACAAGCTCAAATATAGCAGGAGCTGAACTTGGTTGTGTTATGTGGTTTGGAGATTTAATTGATATCAGACACTTTCCTTATGATGGGCAGGAACTGTATATTCGAATGGCGGCTTCGGAGCTAGGGAAAGAACGTCAGAGCAAGAAGAAGCTGACAATAACAATTGTCTCAACCTTGGGTGCAATTTCCGTAGTGCTTTTACTGGGCTTTTGTTATTATATCTACCAAGACCAGAGAAAGAGGAAGATGACTGATAATCCAAATGACAATGAAGGAGATCAAAACAGGGGAGAAAGTGTAGATGATCTGGATCTCCCACTGCTTGACTTTTCAACAATAGTTGTTGCCACTGATAACTTCTCATTAGAGAACAAGATTGGAGAAGGAGGTTTTGGACCTGTATATTGGGGGAAATTAGCACATGGGCAAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAATGACTGAGTTCAAGAATGAAGTAAAATTGATTGCGAAACTCCAGCACCGAAATCTTGTAAAACTTCTTAGTTGTTGCATCCAAGGAGATAACAAAATGCTGGTGTATGAATACATGCCTAATTCCAGCTTGGATTGTTTCATTTTTGATGATACTAAGAGTAAGTACCTAGATTGGCCTAAACGATTCCACATTATTTGTGGAATTGCTCGGGGTCTTGTTTATCTACATCAAGATTCTAGATTGAGGATTATTCATCGAGATCTCAAACCAAGTAATGTTTTACTCGATGACAAGTTAAACCCAAAGATATCAGATTTTGGCATAGCTAGAATATTTGGAGGAGACCAAGTTGAAGGAAACACAAAACGAGTAGTTGGCACTTATGGATATATGGCACCAGAATATGCAGCCGATGGCCTTTTCTCCGTGAAGTCAGATGTTTTCAGTTTCGGTATATTGTTATTAGAGATCATAAGTGGGAAGAAAAGTAGAGGCTTTTATCATAAAGACCGCTCCAATAACCTGATTGGCCATGCTTGGAATTTGTGGAAAGAAGGGAGTGCAACAGAAATAATAGACACAAACTTAGTGGAATCATGCAATTTATCAAAAGTACTACGTTGTATTCACGTTGGACTCTTGTGTGTCCAACAATACCCAGAGGATAGGCCTACCATGCCCTCTGTGGTTTTAATGTTAGGAAGTGAAACTGAATTGGCTCAACCTAAAGTGCCTGGTTTTTATGCAGAGAAAGATTTCATTGAAACCAATTCACATACAAGTCAAATGGAAGTTAGCTCCAACAGTGAACTAACAATTACCTTATTAGAAGCTCGATGA 2508 0.4043 MMQPKNHKVQPMDTFCFMNIVAYALLISGFKASMAVSSIGQSQILSDASRTTLTSKGGNFDLGFFTPGNSDKRYLGIWYKKIPERVVWVANSVNPTNDSSGVLTVNAAGNLVLTQNNTVVWHTNLTRQAQNPVAELLDSGNFVVRDVNEANPEAYLWQSFDFPSDTSLPGMKLGWDLKTRLNRKITAWNSPDDPTPSGFSWELLLHNYPEFFLMKGSKKFMRIGPWNGLYFSGIPDLKPNPIYNFNFISTSDEVYFTFSLNNTSVISILAVNQTTSQANRYVWVEADQNWLIYQTLPKDYCDNYNLCGPNGNCIISDSPVCQCLKGFKPKIPQAWNTMDWSGGCVRNEALNCNNGSKDGFIGLTGLKVPETEHTWIDQSMSLERCRDKCLSNCSCMAYTSSNIAGAELGCVMWFGDLIDIRHFPYDGQELYIRMAASELGKERQSKKKLTITIVSTLGAISVVLLLGFCYYIYQDQRKRKMTDNPNDNEGDQNRGESVDDLDLPLLDFSTIVVATDNFSLENKIGEGGFGPVYWGKLAHGQEIAVKRLSGSSRQGMTEFKNEVKLIAKLQHRNLVKLLSCCIQGDNKMLVYEYMPNSSLDCFIFDDTKSKYLDWPKRFHIICGIARGLVYLHQDSRLRIIHRDLKPSNVLLDDKLNPKISDFGIARIFGGDQVEGNTKRVVGTYGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKKSRGFYHKDRSNNLIGHAWNLWKEGSATEIIDTNLVESCNLSKVLRCIHVGLLCVQQYPEDRPTMPSVVLMLGSETELAQPKVPGFYAEKDFIETNSHTSQMEVSSNSELTITLLEAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00902 835 Pfam PAN-like domain 352 420 IPR003609 -
Accr13g00902 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 160 - -
Accr13g00902 835 Pfam S-locus glycoprotein domain 222 330 IPR000858 GO:0048544
Accr13g00902 835 Pfam Protein tyrosine and serine/threonine kinase 519 786 IPR001245 GO:0004672|GO:0006468
Accr13g00902 835 SMART ntp_6 355 434 IPR003609 -
Accr13g00902 835 ProSiteProfiles Bulb-type lectin domain profile. 36 157 IPR001480 -
Accr13g00902 835 FunFam receptor-like serine/threonine-protein kinase SD1-8 489 593 - -
Accr13g00902 835 CDD B_lectin 42 163 IPR001480 -
Accr13g00902 835 CDD PAN_AP_plant 350 435 - -
Accr13g00902 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 797 - -
Accr13g00902 835 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 36 780 - -
Accr13g00902 835 SUPERFAMILY Protein kinase-like (PK-like) 504 789 IPR011009 -
Accr13g00902 835 Gene3D Transferase(Phosphotransferase) domain 1 594 801 - -
Accr13g00902 835 CDD STKc_IRAK 524 789 - -
Accr13g00902 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 194 IPR036426 -
Accr13g00902 835 SMART serkin_6 518 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00902 835 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Accr13g00902 835 Pfam D-mannose binding lectin 86 188 IPR001480 -
Accr13g00902 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Accr13g00902 835 Gene3D Phosphorylase Kinase; domain 1 483 593 - -
Accr13g00902 835 ProSiteProfiles Protein kinase domain profile. 518 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00902 835 SMART blect_4 42 163 IPR001480 -
Accr13g00902 835 PIRSF SRK 8 835 IPR024171 GO:0004674
Accr13g00902 835 Gene3D - 33 160 IPR036426 -
Accr13g00902 835 ProSiteProfiles PAN/Apple domain profile. 352 435 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00902 Accr-Chr13 10418209 10421732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00902 449 803 Receptor kinase-like Gene Family AT4G23230 53.933 5.46e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00902 PK_Tyr_Ser-Thr 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00902 - - gmx:100775648 1095.49