Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00900 ATGGACACACTCTGTTTCAGCAACATCGTTGTTTATGTTCTTCTTGTCGCTGGTTTCAAAGCTTCCATGGCAGTTAGTTCCCTTCGTCAATCCCAAAACCTCAGTGACGCCTCAGGAACAACCTTAGTTTCCCAAGGTGGAAACTTTGAGCTCGGTTTCTTCACCCCAGGAAACTCCGGCAAACGCTACCTTGGAATTTGGTACAAGAAAATCCCACAAACTGTTGTCTGGGTAGCAAATAACATCAACCCAATTTACGACTCCTCCGGCGTATTAACGGTTAACACCACCGGCAACCTCGTTCTCACCCAAAACAACACAGTCGTGTGGTACACAAGTTTAACAGCGTCGGCTCAGAATACAGTGGCAGAGCTCTTAGATTCTGGGAATTTTGTGGTGAGAGATGTAGATGAAGCAAACCCAGAAGTTTATTTGTGGCAAAGTTTTGATTTTCCTTCTGATACATTACTTCCTGGTATGAAGCTAGGATGGGACCTAAAAACTCGTCTGAACAGAAAAGTTACAGCTTGGAATAGCCCAGATGATCCAACCCCAAGTGGGTTTTCTTGGGAATTATTGCTTCATACCTATCCTGAGTTTTTCCTTATGAAGGGATCAGACAAGTTCATGAGAATTGGACCTTGGAATGGTTTATATTTCAGTGGTGTACCGGATTTAAAGCCAAACCCAATTTATGATTTCAACTTTATATCCACTTCAGATGAGGTTTACTATATATATAGCCTTAATAACACTTCTGTGATCTCAAGATTGATGATGAACCCAACCAAATCTCAGGACATACGTTATGTGTGGGTGGAGGCATATAAAAGGTGGGAAATTTATCAGACACTTCCTAAGGATTATTGTGATAACTATAATCTCTGTGGACCAAATGGGAATTGCATTATCAGTGACTCACCTGTTTGCCAATGCTTGAAAGGGTTCCAGCCTAAGATACCACAGGCTTGGAACACAATGGATTGGTCAGGTGGGTGTGTGAGAAATGAAGCATTGAACTGTAATAATGGAAGCAAGGATGGGTTTATCAGATTGAGTGGGTTGAAAGTGCCGGAAACTAAACACACTTGGATAGATCAGACTATGAGTCTAGCCAGATGCAGAGACAAGTGTCTGAGTAATTGTTCTTGCATGGCTTATACAAGTTCAAATATATCAGGAGCAGGAAGTGGCTGTGTTATGTGGTTTGGAGATTTAATTGATATCAGAAAGTCTGCTTCTGATGGGCAGGATCTCTTTATTCGAATGGCTGCTTCAGAGCTAGATGAAGAACGTGGAAGCAAGAAGAAGCTGGCAATAACAATAGTCTCAATCTTGGGTGCAATTTCTGTGGTGCTTTTACTAGGTTTTTGTTGCTGCATCTACCAAGCCCAGAGGAAGAGGAAGAAGACTGATACCATTGAAGAAGATCAAAACAGGGGAGAAAGTGAGGATGATCTGGATCTCCCATTGATTGACTTTTCAACTATAGTTATTGCCATCAATAACTTCTCATCAGAGAACAAGATAGGAGAAGGAGGTTTTGGGCCTGTATATAGGGGGAAATTAGCCCATGGGCAAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAATAACTGAGTTTAAGAATGAAGTAAAACTGATAGCGAAACTCCAACACCGGAATCTTGTCAAGCTTTTGGGTTGTTGCACCCAAAGAGATGACAGAATGCTGGTGTATGAATACATGCCTAATGGAAGCTTGGACTGTTTCATTTTTGATGATACTAAAGGAAAAGTGTTGAATTGGTCTAGACGATTCCATATTGTTTGTGGGATTGCTAGAGGTCTTGTCTATCTTCATCAAGATTCTAGATTAAGGATTATTCACCGAGATCTCAAAGCAAGCAACATCTTACTTGACGATAAATTGAATCCAAAAATATCAGATTTCGGCATTGCTAGAATCTTTGGAGGGGACCAAACAGAAGGAAACACAAAGCGAGTAGTTGGCACTTATGGATATATGGCACCTGAATATGCCATAGATGGCCTATTTTCTGTGAAGTCAGATGTGTTTAGTTTCGGCATATTGCTATTGGAGATTATAAGTGGAAAGAGAAGCAGAGGGTTCTATCATCCAAACCACTCCCTCAACCTAATTGGTCATGCTTGGAATCTATGGAAAGAAGGAAGAGCATTGGAACTTATAGACTCAAGCTTAGAGGAAATATGCAATTTATCAAAAGTACGACGTTGTATTCATGTTGGCCTCTTGTGTGTCCAACATTACCCAGAGGATAGGCCTACCATGTCTTCTGTGGTTCTAATGTTGGGAAGTGAAACTGAATTGGCTCAACCTAAAGCACCTGGTTTCTATACCAAGAATGATTTCACTGAAACAAATTCCTACACAACTCCAATGGAAATTAACTCTACCAATGAAGTAACTATTACCTTATTAGAAGCTCGATGA 2466 0.4092 MDTLCFSNIVVYVLLVAGFKASMAVSSLRQSQNLSDASGTTLVSQGGNFELGFFTPGNSGKRYLGIWYKKIPQTVVWVANNINPIYDSSGVLTVNTTGNLVLTQNNTVVWYTSLTASAQNTVAELLDSGNFVVRDVDEANPEVYLWQSFDFPSDTLLPGMKLGWDLKTRLNRKVTAWNSPDDPTPSGFSWELLLHTYPEFFLMKGSDKFMRIGPWNGLYFSGVPDLKPNPIYDFNFISTSDEVYYIYSLNNTSVISRLMMNPTKSQDIRYVWVEAYKRWEIYQTLPKDYCDNYNLCGPNGNCIISDSPVCQCLKGFQPKIPQAWNTMDWSGGCVRNEALNCNNGSKDGFIRLSGLKVPETKHTWIDQTMSLARCRDKCLSNCSCMAYTSSNISGAGSGCVMWFGDLIDIRKSASDGQDLFIRMAASELDEERGSKKKLAITIVSILGAISVVLLLGFCCCIYQAQRKRKKTDTIEEDQNRGESEDDLDLPLIDFSTIVIAINNFSSENKIGEGGFGPVYRGKLAHGQEIAVKRLSGSSRQGITEFKNEVKLIAKLQHRNLVKLLGCCTQRDDRMLVYEYMPNGSLDCFIFDDTKGKVLNWSRRFHIVCGIARGLVYLHQDSRLRIIHRDLKASNILLDDKLNPKISDFGIARIFGGDQTEGNTKRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILLLEIISGKRSRGFYHPNHSLNLIGHAWNLWKEGRALELIDSSLEEICNLSKVRRCIHVGLLCVQHYPEDRPTMSSVVLMLGSETELAQPKAPGFYTKNDFTETNSYTTPMEINSTNEVTITLLEAR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00900 821 Gene3D - 21 149 IPR036426 -
Accr13g00900 821 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00900 821 Pfam D-mannose binding lectin 74 177 IPR001480 -
Accr13g00900 821 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Accr13g00900 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 183 IPR036426 -
Accr13g00900 821 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00900 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Accr13g00900 821 Pfam PAN-like domain 341 409 IPR003609 -
Accr13g00900 821 Pfam Protein tyrosine and serine/threonine kinase 507 773 IPR001245 GO:0004672|GO:0006468
Accr13g00900 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 766 - -
Accr13g00900 821 CDD B_lectin 33 152 IPR001480 -
Accr13g00900 821 Gene3D Transferase(Phosphotransferase) domain 1 580 788 - -
Accr13g00900 821 SMART blect_4 33 152 IPR001480 -
Accr13g00900 821 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Accr13g00900 821 SUPERFAMILY Protein kinase-like (PK-like) 489 775 IPR011009 -
Accr13g00900 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Accr13g00900 821 SMART ntp_6 344 423 IPR003609 -
Accr13g00900 821 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Accr13g00900 821 Gene3D Phosphorylase Kinase; domain 1 463 579 - -
Accr13g00900 821 CDD PAN_AP_plant 339 424 - -
Accr13g00900 821 CDD STKc_IRAK 510 775 - -
Accr13g00900 821 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Accr13g00900 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
Accr13g00900 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 579 - -
Accr13g00900 821 PIRSF SRK 1 821 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00900 Accr-Chr13 10412386 10416055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00900 452 821 Receptor kinase-like Gene Family AT4G23140 52.356 2.10e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00900 PK_Tyr_Ser-Thr 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00900 - - gmx:100775648 1088.56