Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00883 ATGGCCCATAGATTCGATCCCCCAGAAGATTCCGAACCTCTACCTGAGACGGGACAGGACTCACCGTCGTCCGGTGATGATATCTATACCGCAGCACCATCTCCCAAGAAAAGGAAGGGGATAAAGAAGAAGGTGGTGGTGGTACCGATCGGTGACGTAGAGGGATCTAAGAGCAAAGGCGAGACGTATCCACCGTCCGATTCTTGGGCTTGGAGAAAGTACGGCCAGAAGCCCATCAAAGGATCTCCGTATCCCAGGGGATATTACCGATGTAGTAGTTCGAAGGGTTGTCCCGCCAGGAAACAAGTAGAGAGAAGCCGTGTGGACCCCACAAAGCTCATCGTCACCTACGCTCACGACCACAACCACTCCGCCCCACCCGGCAAGCTTCACTCAACCACCTCCACCTCCTCCTCCTCCTCCGCCGCCACATCGGCCGCTGTTGCTGACGCTAACGACGGTTTACCGACCGAATCGGACTCTAAAGTCGAATCGGAAGAGAATCTGACGGTGTTCGCGAGCCATCCTGATATAGAACTCGACGGCGACTCGGCTGTTCTGCTCGGCTACCACCACGGCCAATTCGGATGGTTCGATGACATGGCATCCACGACGAGAGTGCTGGAAAGCCCGATCTACTGCGGAGAGTTGGAGGATGTGACGTTGATGACGATGAGGGAGGATGAGGACGAATCGCTGTTCGCGGATCTCGGCGAGTTACCGGAATGTTCGGTGGTTTTCCGGCGAACGAATATTCCGAGATCAAGCGGGATCCAGTGCGGTGAGATCACATGGTAA 798 0.5539 MAHRFDPPEDSEPLPETGQDSPSSGDDIYTAAPSPKKRKGIKKKVVVVPIGDVEGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAHDHNHSAPPGKLHSTTSTSSSSSAATSAAVADANDGLPTESDSKVESEENLTVFASHPDIELDGDSAVLLGYHHGQFGWFDDMASTTRVLESPIYCGELEDVTLMTMREDEDESLFADLGELPECSVVFRRTNIPRSSGIQCGEITW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00883 265 MobiDBLite consensus disorder prediction 1 85 - -
Accr13g00883 265 MobiDBLite consensus disorder prediction 120 166 - -
Accr13g00883 265 FunFam WRKY transcription factor 65 52 126 - -
Accr13g00883 265 Pfam WRKY DNA -binding domain 67 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr13g00883 265 ProSiteProfiles WRKY domain profile. 66 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr13g00883 265 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 245 IPR044810 GO:0003700
Accr13g00883 265 Gene3D WRKY domain 52 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr13g00883 265 SUPERFAMILY WRKY DNA-binding domain 61 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr13g00883 265 SMART WRKY_cls 65 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr13g00883 265 MobiDBLite consensus disorder prediction 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00883 Accr-Chr13 10153622 10156336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00883 9 252 WRKY Transcription Factor Family AT3G58710 51.575 4.58e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr13g00883 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00883 - - gmx:100170680 324.709