Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00852 ATGGTCACGCCGAACCAGAATCGGCCACCCCTATCACTCTCATCCCCACCTTCATGTAGCTCTTCTTCTACTCCGAAGAAGTTTGTTGGCGATGAGCTATCTGTAAATAAAGACCGACAACTTGGTGGAGAAAGAATGGTGGGAACTCCGATTAATGGAAGAGCTAGGCAAGCTTTTACGGTGGCTAACGGTGGCCATGATCTTGGTCCCAGCAGTGCTCCGCCCAGCAATGCCGGTTCGGATTGTGGTAGTATTGAGTTCTCGAGAGAGGATGTTGAAGCGTTGCTGAATGAGAAAGCCAAGAGAAAGGACAGGTTCAATTATAAGGAAAGATGTGAAAATATGGCGGAATATATAAAAAGGCTTAAGATTTGCATCAGATGGTTCCAAGACCTTGAGCTAAGTTACTCTCTGGAGCAAGAAAAGTTAAAGAATTCACTAGAGTTATCCCAGCAAAAATGCGTGGAGATAGAGATACTTCTTAAACTCAAGGAAGCAGAACTGAATTCAATTATTGTGGAAATGAGAAGGAATTGCACTTCTTTACAAGAGAAGTTAATAAAGGAGGAGTCTGAAAAGCAGGCTGCAGTGGAGTCTCTTGCCAAAGAGAGAGAGGCTAAGCTTAACATTGAGAGGTCACAGACCTCTCTGTCAGATGACCTTGGTAGAGCTCAACGCGAGCTCCAAAGTGCAAATCAAAAGATATCGTCACTTAATGAAATGTATAAGCGGTTACAAGACTACATAACCAGTCTCCAACAGTACAATGGGAAGCTTCATACAGAACTTTCTACAGTTGAAGATGAACTTAAGCGTGTGGAAAAAGAGAAGGCTACTGCAGTGGAAAACCTCACCATGTTAAGGGGTCAACTTACTTTGTCCCAATCTTCTCAAGAAGAGGCCATAAAACAGAAGGACGCTTTGTCTAGTGAAGTTGGATCTCTTAGAGGAGAATTGCAGCAAGTCAGAGATGATCGAGATCGCCAATTATCTCAAGTGGAAACTTTAACTTATGAATTAGTAAGATTAAAAGAATCTACAGAAAAGTCCTGCAGTGAATTGGGCACTTTGAGGATAAAAGCAAACGAACTAGAGGCAAGATGTTCAATGCAAGATAGTCAGATAAAGACATTGCAAGAGCAGTTGGCAGTTGCAGAGAAGAAAGTGCAGGTGTCTGATATATCTGCATTTGAGACAAGGACGGAATTTGAAGGGCAACAAAAACTTGTGAGTGAGTTACAAAGACGCTTGGCAGATGCAGAATCTAAACTGATAGAAGGGGAGAAGCTGCGGAAGAAGTTACACAATACCATTCTGGAATTAAAAGGGAACATCCGCGTATTCTGTAGAGTGCGCCCTTCCTTGCCCGATGAACCCTGTAACACAGACAACAAGATTATCTCTTACCCCACATCAATGGAAGCTTCTGGTCGAGGCATTGACTTAAACCAAACTGGCCAAAAGCATTCTTTTACATTTGATAAGGTTTTTGCGCCAGACGCATCACAAGAAGAGGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGACGGGTATAAGGTTTGCATTTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGCAGACCTGGACAGCCAGAGGAGAAGGGGTTGATACCTCGATCATTACAACAGATATTTGAAACAAAGGAGTCTTTGAAATCCCAAGGATGGAAATATGAAATGCAGGTCTCGATGTTGGAAATATATAATGAAACTATTCGTGATTTGTTATCAACGAATCGATCATCATCAGATGCAGCACGTACAGAAAATGGCACTCCTGGAAAGCAGTATGCGATCAAACATGATGCCAATGGAAATACAATTGTTTCTGATCTTACAGTAGTGGACGTTCAAAGCGTTAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATAGCAGGTCTGTTGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTGTTCACTCTTCGAATATATGGTGTTAATGAGAGTACTGACCAACAAGTGCAAGGTATTCTGAATCTAATTGATCTTGCTGGGAGCGAGCGTCTTTCAAAAAGTGGGTCCACTGGGGACAGGCTGAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCATTAAGTGATGTTATATTTGCATTGGCAAAAAAGGAGGATCATGTGCCCTTCAGGAACTCAAAGCTTACATATCTACTTCAGCCTTGCCTTGGTGGGGACTCGAAGATACTAATGTTTGTAAATATCTCTCCTGATCCTTCCTCAGTAGGAGAGTCACTGTGCTCACTCCGATTCGCCTCCCGAGTGAATGCTTGTGAGATTGGAACACCTCGACGGCAAACCAATGGCCGTACCTCTGACTCACGCCTAAGCTATTTCTAA 2418 0.4222 MVTPNQNRPPLSLSSPPSCSSSSTPKKFVGDELSVNKDRQLGGERMVGTPINGRARQAFTVANGGHDLGPSSAPPSNAGSDCGSIEFSREDVEALLNEKAKRKDRFNYKERCENMAEYIKRLKICIRWFQDLELSYSLEQEKLKNSLELSQQKCVEIEILLKLKEAELNSIIVEMRRNCTSLQEKLIKEESEKQAAVESLAKEREAKLNIERSQTSLSDDLGRAQRELQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSTVEDELKRVEKEKATAVENLTMLRGQLTLSQSSQEEAIKQKDALSSEVGSLRGELQQVRDDRDRQLSQVETLTYELVRLKESTEKSCSELGTLRIKANELEARCSMQDSQIKTLQEQLAVAEKKVQVSDISAFETRTEFEGQQKLVSELQRRLADAESKLIEGEKLRKKLHNTILELKGNIRVFCRVRPSLPDEPCNTDNKIISYPTSMEASGRGIDLNQTGQKHSFTFDKVFAPDASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGQPEEKGLIPRSLQQIFETKESLKSQGWKYEMQVSMLEIYNETIRDLLSTNRSSSDAARTENGTPGKQYAIKHDANGNTIVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKILMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRTSDSRLSYF 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00852 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 782 IPR027417 -
Accr13g00852 805 MobiDBLite consensus disorder prediction 1 29 - -
Accr13g00852 805 Coils Coil 361 388 - -
Accr13g00852 805 Coils Coil 214 248 - -
Accr13g00852 805 SMART kinesin_4 442 792 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr13g00852 805 MobiDBLite consensus disorder prediction 62 81 - -
Accr13g00852 805 PANTHER KINESIN-LIKE PROTEIN KLP-3 295 792 IPR027640 GO:0003777|GO:0007018
Accr13g00852 805 CDD KISc_C_terminal 442 786 - -
Accr13g00852 805 PRINTS Kinesin heavy chain signature 520 541 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr13g00852 805 PRINTS Kinesin heavy chain signature 685 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr13g00852 805 PRINTS Kinesin heavy chain signature 734 755 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr13g00852 805 PRINTS Kinesin heavy chain signature 654 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr13g00852 805 Gene3D Kinesin motor domain 391 786 IPR036961 -
Accr13g00852 805 Coils Coil 172 192 - -
Accr13g00852 805 Pfam Kinesin motor domain 450 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr13g00852 805 ProSiteProfiles Kinesin motor domain profile. 444 784 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr13g00852 805 MobiDBLite consensus disorder prediction 1 50 - -
Accr13g00852 805 Coils Coil 256 290 - -
Accr13g00852 805 Coils Coil 305 325 - -
Accr13g00852 805 Coils Coil 403 430 - -
Accr13g00852 805 FunFam Kinesin-like protein 390 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00852 Accr-Chr13 9746593 9752513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00852 113 796 Calmodulin-binding Proteins AT5G65930 31.150 3.92e-76 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00852 K10405 - gmx:100784221 1275.77