Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00850 ATGATTGTTTCGAAGGCTAGCTTCTGCGTTCTTTTGGTTCTTCTCACGACATCAGTTAGTTCAAAAGATTCTGAAGAAACACAGGAAGATTTCCTTTGCCAACAACTGCTTGATCCCACCTCTGGATTGTTGGATGAGAATACGGTACTGCATTTACGGAACAAGTGCTCTGTGGATTTGATTCAATTGAAGGAAGAAGTTAGAAATCTTGACTTATGTTTTCCACATGAATCATCACCCAGTTGCACCAATGATATTGGTTCAGAGGCTCAATTATTAAAAGGAAAGAATATCCAAAATTGGATTAATGCTTGCCATCCTCAATTGAAGCAAATCTTTCTTCACTGTTTGAGAAAGAATAATCTTCCACTCCAAGGTGTATCCGGTGATGAAAATGATGATTCCAGATCCAATGACGCCGCAGTTAAATCATATATCTACACTCAAGAACCCGCAAGGATGATGTATGCTGAAGATGTATCTAAATCCAAAGGAAATGAAGATAAGAAAAAAGCTAAAAAGATTAAGAAGAAGAAGAAGAAGAAAAGAGATAAAATCATGGTTATAGTTTTTGTTGCTGCAGCTGGCGTGTCAGTGACGCTAGCGGTACTGCTCTGTGTTTTGTGTTGCTGTTGTCCTGGCAAAAGCCAAGTTGGAAAATATGATGAGAGGCCCCTTCTCAGTCTGAGCAAGAGTGACTACTCTTCCTCAGGTTATACTCCCAAATATTCTTCTGGAAATTCAGTAAGAGATCAGAAATTTTGGTTTCAGTCACATGATAATAATTCAATTGACCAAAAAAGGACATCATCTCTTAATGGCAATTTTCCTGTTGGATCTGATGTGCAGGATTCACCTGCATTTGCTGGTACTGATGCTGCTGCCAGACCATCATTTGACCTGAAGCCTCCTCCTGGTAGGGTGGGAGCCAGCCCTTTGAAACCTCCACCTGGAAGGCCAGATCTCCTTGCCCCTGAGCCACCTTCTAGTAATTCCACTACTTCTACTCCTCCTCCTCCTCCTCCTGTACGCCCACTACCACCCAAAACTTCTACTGGACCACCTCCACCACCACCACCAGCACTACCTGGTGCCAAAAAAGGTGCTGGTGCACCACCACCACCACCTTCTCAGAATGGCAAAGGTCCTCCTCGACCACCTCTGCCACTCGGTGTAAGGGGTCCACACCCTTTAGTTGTACGGAAAAAATCAATAGCCGAAGGATCTGGAGGAGGAGCTGCTGATTCAGAAGGTGGTGCTGATTCTCAGAAAGCCAAGTTGAAACCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATGAAACAATGGTTTGGAATCAGCTTGAAGGAGGATCATTCCAGTTTGATGAGAAAACGATGGAGTCACTTTTTGGCTATACCAATACAGATAAAAGCAAAGGTCAAGTCAAGAAAGGATCTGCCTCCATGGAGCAGGCATCTCAGTTTATCCAGATCATTGACTCAAAGAAATCACAAAATTTGTCAATCCTATTGCGTGCTTTGAATGTGACTATGGAAGAAGTTTATGATGCACTTACTGAAGGAAATGAGATCCCCTCAGAATTTATCCAATCCTTGCTCAAGATGGCACCCTCATCTGAGGAAGAACTTAAGCTTAGACTTTTTAACGGCGAACTGTCTCAGCTTGGGCCTGCTGACCGGTTCCTGAAAGCCCTTGTTGATATTCCATTTGCTTTTAAACGACTGGAATCACTTCTTTTTATGGGTACTCTTCAAGAGGAGCTTACCTTCACCAAGGATGCTTTTGCAGTTTTAGAGGTTGCTAGTACAGAACTAAAAGGTAGCCGGCTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTCCGTGGTGGTGCGCAAGCATTTAAACTTGACACACTCCTTAAACTGTCTGATGTTAAATCAGCAGATGGCAAAACTACACTCTTACACTTTGTTGTCAAAGAGATAAGCCGAACTGAAGGCATAAGAGCAGCTCGTACGGCGATAGAGTGCAAGAGTTTCTCTAGCATTAAAACAGATGACCTGCTTGAGGAAGTTCCCATGGAATCTGAAGAGCGGTATCGCGAACTTGGTCTCCAGGTGGTATCACGATTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCAGCTCTAGATGCTGATGCTTTAACAGGAACAACTGCAAAAGCTGGGCATTCTCTCTTGAAATGCAAAGAATTCTTAAACAAAGACCTCAAGGAGTTAGAAGGCGAAAACAAAGGAGGGTTTCATCAGACAGTGGAGAGTTTTGTGGAGAATGCTGAAAGAGCTATCACGAACCTGGTGGAAGAAGAGAAGAGGATCACGGCTATGGTGAAGAGTACAGCTGACTACTTCCATGGAAACAGCGGGAGGGAAGAAGGGTTAAGACTGTTTGTGATCGTACGAGACTTCTTGGTCATACTGAATAAGGTATGCAGGGAGGTTGGAGATGAACAGAAGAAGGCAGCAGCAGCAAAAGCTCCTAAAAAAGAGCTTGCCAAGCCTCCTTCTTCTGAGAGTGCTCACCCACCACCACCACACAAGAAGCTTCTTTCAGGGTTATCAGAGAGGAGGATGGATGACTTTAGTTCAGATGATGAGAGTCCATAG 2661 0.4371 MIVSKASFCVLLVLLTTSVSSKDSEETQEDFLCQQLLDPTSGLLDENTVLHLRNKCSVDLIQLKEEVRNLDLCFPHESSPSCTNDIGSEAQLLKGKNIQNWINACHPQLKQIFLHCLRKNNLPLQGVSGDENDDSRSNDAAVKSYIYTQEPARMMYAEDVSKSKGNEDKKKAKKIKKKKKKKRDKIMVIVFVAAAGVSVTLAVLLCVLCCCCPGKSQVGKYDERPLLSLSKSDYSSSGYTPKYSSGNSVRDQKFWFQSHDNNSIDQKRTSSLNGNFPVGSDVQDSPAFAGTDAAARPSFDLKPPPGRVGASPLKPPPGRPDLLAPEPPSSNSTTSTPPPPPPVRPLPPKTSTGPPPPPPPALPGAKKGAGAPPPPPSQNGKGPPRPPLPLGVRGPHPLVVRKKSIAEGSGGGAADSEGGADSQKAKLKPFFWDKVQANSDETMVWNQLEGGSFQFDEKTMESLFGYTNTDKSKGQVKKGSASMEQASQFIQIIDSKKSQNLSILLRALNVTMEEVYDALTEGNEIPSEFIQSLLKMAPSSEEELKLRLFNGELSQLGPADRFLKALVDIPFAFKRLESLLFMGTLQEELTFTKDAFAVLEVASTELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKSADGKTTLLHFVVKEISRTEGIRAARTAIECKSFSSIKTDDLLEEVPMESEERYRELGLQVVSRLSSELENVKKAAALDADALTGTTAKAGHSLLKCKEFLNKDLKELEGENKGGFHQTVESFVENAERAITNLVEEEKRITAMVKSTADYFHGNSGREEGLRLFVIVRDFLVILNKVCREVGDEQKKAAAAKAPKKELAKPPSSESAHPPPPHKKLLSGLSERRMDDFSSDDESP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00850 886 ProSiteProfiles Formin homology-2 (FH2) domain profile. 417 851 IPR015425 -
Accr13g00850 886 MobiDBLite consensus disorder prediction 836 886 - -
Accr13g00850 886 Gene3D Formin, FH2 domain 423 859 IPR042201 -
Accr13g00850 886 PANTHER FORMIN-RELATED 151 858 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Accr13g00850 886 MobiDBLite consensus disorder prediction 868 886 - -
Accr13g00850 886 MobiDBLite consensus disorder prediction 308 324 - -
Accr13g00850 886 MobiDBLite consensus disorder prediction 331 393 - -
Accr13g00850 886 MobiDBLite consensus disorder prediction 158 178 - -
Accr13g00850 886 MobiDBLite consensus disorder prediction 265 395 - -
Accr13g00850 886 MobiDBLite consensus disorder prediction 836 853 - -
Accr13g00850 886 SMART it6_source 417 840 IPR015425 -
Accr13g00850 886 Pfam Formin Homology 2 Domain 422 823 IPR015425 -
Accr13g00850 886 MobiDBLite consensus disorder prediction 265 280 - -
Accr13g00850 886 SUPERFAMILY Formin homology 2 domain (FH2 domain) 337 841 - -
Accr13g00850 886 Coils Coil 774 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00850 Accr-Chr13 9714555 9720062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00850 421 877 FH2 protein (formin) Gene Family AT5G54650 64.208 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03054 1 67414836 67420561 Accr13g00850 13 9714555 9720062 CCT
Accr13g00850 13 9714555 9720062 Accr13g00850 13 9714555 9720062 ECH