Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00849 ATGATGATTGTTTCGAAGGCTAGCTTCTGCGTTCTTTTGGTTCTTCTCACGACATCAGTTAGTTCAAAAGATTCTGAAGAAACACAGGAAGATTTCCTTTGCCAACAACTGCTTGATCCCACCTCTGGATTGTTGGATGAGAATACGGTACTGCATTTACGGAACAAGTGCTCTGTGGATTTGATTCAATTGAAGGAAGAAGTTAGAAATCTTGACTTATGTTTTCCACATGAATCATCACCCAGTTGCACCAATGATATTGGTTCAGAGGCTCAATTATTAAAAGGAAAGAATATCCAAAATTGGATTAATGCTTGCCATCCTCAATTGAAGCAAATCTTTCTTCACTGTTTGAGAAAGAATAATCTTCCACTCCAAGGTGTATCCGGTGATGAAAATGATGATTCCAGATCCAATGACGCCGCAGTTAAATCATATATCTACACTCAAGAACCCGCAAGGATGATGTATGCTGAAGATGTATCTAAATCCAAAGGAAATGAAGATAAGAAAAAAGCTAAAAAGATTAAGAAGAAGAAGAAGAAGAAAAGAGATAAAATCATGGTTATAGTTTTTGTTGCTGCAGCTGGCGTGTCAGTGACGCTAGCGGTACTGCTCTGTGTTTTGTGTTGCTGTTGTCCTGGCAAAAGCCAAGTTGGAAAATATGATGAGAGGCCCCTTCTCAGTCTGAGCAAGAGTGACTACTCTTCCTCAGGTTATACTCCCAAATATTCTTCTGGAAATTCAGATTCACCTGCATTTGCTGGTACTGATGCTGCTGCCAGACCATCATTTGACCTGAAGCCTCCTCCTGGTAGGGTGGGAGCCAGCCCTTTGAAACCTCCACCTGGAAGGCCAGATCTCCTTGCCCCTGAGCCACCTTCTAGTAATTCCACTACTTCTACTCCTCCTCCTCCTCCTCCTGTACGCCCACTACCACCCAAAACTTCTACTGGACCACCTCCACCACCACCACCAGCACTACCTGGTGCCAAAAAAGGTGCTGGTGCACCACCACCACCACCTTCTCAGAATGGCAAAGGTCCTCCTCGACCACCTCTGCCACTCGGTGTAAGGGGTCCACACCCTTTAGTTGTACGGAAAAAATCAATAGCCGAAGGATCTGGAGGAGGAGCTGCTGATTCAGAAGGTGGTGCTGATTCTCAGAAAGCCAAGTTGAAACCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATGAAACAATGGTTTGGAATCAGCTTGAAGGAGGATCATTCCAGTTTGATGAGAAAACGATGGAGTCACTTTTTGGCTATACCAATACAGATAAAAGCAAAGGTCAAGTCAAGAAAGGATCTGCCTCCATGGAGCAGGCATCTCAGTTTATCCAGATCATTGACTCAAAGAAATCACAAAATTTGTCAATCCTATTGCGTGCTTTGAATGTGACTATGGAAGAAGTTTATGATGCACTTACTGAAGGAAATGAGATCCCCTCAGAATTTATCCAATCCTTGCTCAAGATGGCACCCTCATCTGAGGAAGAACTTAAGCTTAGACTTTTTAACGGCGAACTGTCTCAGCTTGGGCCTGCTGACCGGTTCCTGAAAGCCCTTGTTGATATTCCATTTGCTTTTAAACGACTGGAATCACTTCTTTTTATGGGTACTCTTCAAGAGGAGCTTACCTTCACCAAGGATGCTTTTGCAGTTTTAGAGGTTGCTAGTACAGAACTAAAAGGTAGCCGGCTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTCCGTGGTGGTGCGCAAGCATTTAAACTTGACACACTCCTTAAACTGTCTGATGTTAAATCAGCAGATGGCAAAACTACACTCTTACACTTTGTTGTCAAAGAGATAAGCCGAACTGAAGGCATAAGAGCAGCTCGTACGGCGATAGAGTGCAAGAGTTTCTCTAGCATTAAAACAGATGACCTGCTTGAGGAAGTTCCCATGGAATCTGAAGAGCGGTATCGCGAACTTGGTCTCCAGGTGGTATCACGATTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCAGCTCTAGATGCTGATGCTTTAACAGGAACAACTGCAAAAGCTGGGCATTCTCTCTTGAAATGCAAAGAATTCTTAAACAAAGACCTCAAGGAGTTAGAAGGCGAAAACAAAGGAGGGTTTCATCAGACAGTGGAGAGTTTTGTGGAGAATGCTGAAAGAGCTATCACGAACCTGGTGGAAGAAGAGAAGAGGATCACGGCTATGGTGAAGAGTACAGCTGACTACTTCCATGGAAACAGCGGGAGGGAAGAAGGGTTAAGACTGTTTGTGATCGTACGAGACTTCTTGGTCATACTGAATAAGGTATGCAGGGAGGTTGGAGATGAACAGAAGAAGGCAGCAGCAGCAAAAGCTCCTAAAAAAGAGCTTGCCAAGCCTCCTTCTTCTGAGAGTGCTCACCCACCACCACCACACAAGAAGCTTCTTTCAGGGTTATCAGAGAGGAGGATGGATGACTTTAGTTCAGATGATGAGAGTCCATAG 2559 0.4408 MMIVSKASFCVLLVLLTTSVSSKDSEETQEDFLCQQLLDPTSGLLDENTVLHLRNKCSVDLIQLKEEVRNLDLCFPHESSPSCTNDIGSEAQLLKGKNIQNWINACHPQLKQIFLHCLRKNNLPLQGVSGDENDDSRSNDAAVKSYIYTQEPARMMYAEDVSKSKGNEDKKKAKKIKKKKKKKRDKIMVIVFVAAAGVSVTLAVLLCVLCCCCPGKSQVGKYDERPLLSLSKSDYSSSGYTPKYSSGNSDSPAFAGTDAAARPSFDLKPPPGRVGASPLKPPPGRPDLLAPEPPSSNSTTSTPPPPPPVRPLPPKTSTGPPPPPPPALPGAKKGAGAPPPPPSQNGKGPPRPPLPLGVRGPHPLVVRKKSIAEGSGGGAADSEGGADSQKAKLKPFFWDKVQANSDETMVWNQLEGGSFQFDEKTMESLFGYTNTDKSKGQVKKGSASMEQASQFIQIIDSKKSQNLSILLRALNVTMEEVYDALTEGNEIPSEFIQSLLKMAPSSEEELKLRLFNGELSQLGPADRFLKALVDIPFAFKRLESLLFMGTLQEELTFTKDAFAVLEVASTELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKSADGKTTLLHFVVKEISRTEGIRAARTAIECKSFSSIKTDDLLEEVPMESEERYRELGLQVVSRLSSELENVKKAAALDADALTGTTAKAGHSLLKCKEFLNKDLKELEGENKGGFHQTVESFVENAERAITNLVEEEKRITAMVKSTADYFHGNSGREEGLRLFVIVRDFLVILNKVCREVGDEQKKAAAAKAPKKELAKPPSSESAHPPPPHKKLLSGLSERRMDDFSSDDESP 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00849 852 MobiDBLite consensus disorder prediction 274 290 - -
Accr13g00849 852 MobiDBLite consensus disorder prediction 297 359 - -
Accr13g00849 852 SMART it6_source 383 806 IPR015425 -
Accr13g00849 852 PANTHER FORMIN-RELATED 149 824 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Accr13g00849 852 MobiDBLite consensus disorder prediction 802 819 - -
Accr13g00849 852 Pfam Formin Homology 2 Domain 388 789 IPR015425 -
Accr13g00849 852 MobiDBLite consensus disorder prediction 159 179 - -
Accr13g00849 852 Coils Coil 740 760 - -
Accr13g00849 852 SUPERFAMILY Formin homology 2 domain (FH2 domain) 303 807 - -
Accr13g00849 852 MobiDBLite consensus disorder prediction 834 852 - -
Accr13g00849 852 Gene3D Formin, FH2 domain 389 825 IPR042201 -
Accr13g00849 852 MobiDBLite consensus disorder prediction 802 852 - -
Accr13g00849 852 ProSiteProfiles Formin homology-2 (FH2) domain profile. 383 817 IPR015425 -
Accr13g00849 852 MobiDBLite consensus disorder prediction 233 361 - -
Accr13g00849 852 MobiDBLite consensus disorder prediction 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00849 Accr-Chr13 9714555 9720065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00849 387 843 FH2 protein (formin) Gene Family AT5G54650 64.208 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00849 - - pcin:129312728 746.117