Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00843 ATGGAATCACATCAAATTTTCAGTTACAGTGAGAATGATACTGGGCTAATTAGTTCATCATCTCATCCTGCTTTTTCGTCGGTACCTAGCAGGTTGCCTGAATCCTTGAAAATTGACTTAGGAAACTCGCCTAATTCATCCTTTCCCAATCACTTTGATTCTGATTCTCTTTCAACACTGAGTGACAGCCAGGATAATAACAAATACAGTTATAGTGAGATCCTTTCTGGTTTGACTTGTGACTCTTCGCTGGAATCCAATCACAATTGGCACAATTCAACTTCGTCCTCCATGGATTATCGCCAAGATGGACCGCGTCTATATTCTTCTGCCAGGAGCTCTCTTCTAAATGATGTAAATTGCAGCCAGAAAATCAAACATGTTCTGCTAGGAATAGAATCAACTCTGATGGCCCCTAACAATGGTAATGATGATGCAACTGCATTGAATAGGCCTTTTACCGAGAATGTTAGTAGCAGGCCGATGACTTCTGGCTTTAGCAACATATCTTGGAGTAATGACCAGAGTTTACAGAATTTTCAAAATCAGCCGCCATATTTTGCTTCTGGTAAACGTCAGAAAGCAATAGAGGAAGAACTGGTGCAAGGCTTTCCACCGAGTAATTTGAGGCAGTTGTTGATTGCATGTGCAAAAGCGCTTTCAGAAAACAACATGAAATATTTTGATGAGTTGATTGAAAGGGCTAAAAGTTGTGTGTCTATCACAGGCGAGCCAATCCAAAGGCTTGGTGCTTACTTGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCAGGGAACAACATCTATCGATCTCTCCGATGCAAAGAGCCAGAAGGCAAAGAATTGCTCTCTTATATGCACATGCTTTATGAAATCTGCCCTTACTTGAAATTCGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAGAAATGAGGACCGTATTCACATCATAGACTTTCAGATTGCTCAGGGAAGTCAATGGGTTACTCTCCTTCAAGCCCTTGCAGCTAGACCTAGTGGGGCCCCCTATGTTAGGATCACAGGGATTGATGATCCTGTCTCTAAATATGCTCGTGGCGATGGGCTAGAGGCGGTTGGTAAACGGTTGGCCATGATATCTGATAAGTTTCACATCCCGGTTGAGTTTCATGGATTGCCGGTTTTCGGTCCTGATGTGACAAGGGATGTGCTTGACATCCGGCCCGGGGAGGCTTTGGCCGTGAACTTTCCTTTGCAGCTCCATCACACGGCTGATGAAAGTGTTGATGTGAATAACCCAAGAGATGGGCTTCTGAGAATGGTAAAATCGCTATCTCCCAAGGTGGTCACACTGGTGGAACAAGAATCAAACACCAACACAACTCCTTTCTTCAACAGGTTTGTAGAAACCTTGGATTACTACTTGGCAATGTTCGAATCCATCGACGTCACCCTCTCGAGAGAGGACAAGACAAGGATTAACGTAGAACAACATTGTTTGGCCAGGGATGTTGTGAATGTCATTGCTTGCGAAGGGAAGGAAAGGGTTGAGCGACACGAACTGTTTGGCAAGTGGAAGTCTAGGTTGACCATGGCCGGTTTCCAACAATATCCGATGAGCCCCTATGTGAATTCGGTTATTCGGAGCCTGCTGAGATACTATTCAGAGAATTATACACTGGTAGAGAAGGATGGTGCTATGTTGTTGGGGTGGAAGAGTAGAAATCTGATATCAGCCTCAGCATGGCATTGA 1740 0.4437 MESHQIFSYSENDTGLISSSSHPAFSSVPSRLPESLKIDLGNSPNSSFPNHFDSDSLSTLSDSQDNNKYSYSEILSGLTCDSSLESNHNWHNSTSSSMDYRQDGPRLYSSARSSLLNDVNCSQKIKHVLLGIESTLMAPNNGNDDATALNRPFTENVSSRPMTSGFSNISWSNDQSLQNFQNQPPYFASGKRQKAIEEELVQGFPPSNLRQLLIACAKALSENNMKYFDELIERAKSCVSITGEPIQRLGAYLVEGLVARKEASGNNIYRSLRCKEPEGKELLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWVTLLQALAARPSGAPYVRITGIDDPVSKYARGDGLEAVGKRLAMISDKFHIPVEFHGLPVFGPDVTRDVLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAMFESIDVTLSREDKTRINVEQHCLARDVVNVIACEGKERVERHELFGKWKSRLTMAGFQQYPMSPYVNSVIRSLLRYYSENYTLVEKDGAMLLGWKSRNLISASAWH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00843 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
Accr13g00843 579 MobiDBLite consensus disorder prediction 1 28 - -
Accr13g00843 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 154 575 IPR005202 -
Accr13g00843 579 Pfam GRAS domain family 209 578 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00843 Accr-Chr13 9650172 9651911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00843 208 578 GRAS Transcription Factor Family AT5G48150 65.054 7.66e-177 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr13g00843 GRAS 1.1e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00843 - - pmum:103342480 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03048 1 67363806 67365563 Accr13g00843 13 9650172 9651911 CCT
Accr13g00843 13 9650172 9651911 Accr13g00843 13 9650172 9651911 ECH