Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00818 ATGGCAGAGAGTGGGAGATCAATTTACATATCCCACGGAAACAAGAACGAAGATAGTAACAACAGCAGCAACAACATCACCGCCAAACCATCTTCTTCATTGTTTTCTTCTCCTTCTCGGCTTCTTCAAAAGGGTTCGTTATTTGACCTGAACGAAGAAGCTATGGACGATCTTGGTGGTGATGTTGATAATGGAGGATCGTCTTCATCGTCATCGTCAGGAGAAGGTAATGTGAGTAGCAACAACTCAAGTTCAGAAGTGAAAGAGAGAACCAGTAGTAGTTTGAGGCAATATGTAAGATCTAAAATGCCTAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCGTGCTGTTGAAAGGCTTGGTGGACAGGAAAAAGCAACGCCCAAGTTAGTTTTACAGTTGATGAATGTGAGAGGACTTAGCATTGCGCATGTTAAGAGCCATCTGCAGATGTATCGAAGCAAGAAACTTGATGAGTCTGGCCAAGTTTTATCCCAGAATAGGGCAACATTAATAAAGCAAGGACACAGAGATCATATTTTGGATATGTACCAAAGATTTAGTGCTCATCATCAGGGAGGAGGACACTCTGGGATTGATGACTATCTCCCAACATCACCTCTCGTTATGAAGCCAATGTTCGACTTTAAGTCTCATGGTTATCCAAGATATCAACCAGAGACAATATCAAGTTCATCAGTAGTAGGTTGGAGCAACAACGACTTAGAGTTGTGTGAGGCTGGTAATAAAGACAGAAGGATGATGATTCAGAGGAACAAGATTATTGGAGGGTGTCACGTATTTGAGGTTAACGATGCTACTAATAATAATGTTCCTCTTCGAATAAGAAATAATGAAACTCTTAGGCCAAACCTGTTTCTCGAAGACGAGAAATGGCCTCCTCGTGAAGGAAATGACAAACCTTATTGGGATGATAAATCTTGTCCCTGGAAAAACCTCACAAATTGCTTTATCAACCGAAACCTTCAATTTGACGCCCAGATTCATCATCATGATAAAAAAGATGTGATGCCACATTTAATGAGATATCAGAATCATTTATCAGAAGGAGGTGAAGTCAAAGGTCAATTAGTAGATAGTTTGAAGGAGATGAAGGAACCAACCAGTTTTCTAAAGCTATGTTTAACTCAAGATTCTGCCAACAACAATCCTGGTCCTCCAGGTGATGATGGAGGAATTAATACAATGTTATCTCTTTCATTATAA 1236 0.4021 MAESGRSIYISHGNKNEDSNNSSNNITAKPSSSLFSSPSRLLQKGSLFDLNEEAMDDLGGDVDNGGSSSSSSSGEGNVSSNNSSSEVKERTSSSLRQYVRSKMPRLRWTPDLHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRATLIKQGHRDHILDMYQRFSAHHQGGGHSGIDDYLPTSPLVMKPMFDFKSHGYPRYQPETISSSSVVGWSNNDLELCEAGNKDRRMMIQRNKIIGGCHVFEVNDATNNNVPLRIRNNETLRPNLFLEDEKWPPREGNDKPYWDDKSCPWKNLTNCFINRNLQFDAQIHHHDKKDVMPHLMRYQNHLSEGGEVKGQLVDSLKEMKEPTSFLKLCLTQDSANNNPGPPGDDGGINTMLSLSL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00818 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 160 IPR017930 -
Accr13g00818 411 Pfam Myb-like DNA-binding domain 106 156 IPR001005 -
Accr13g00818 411 Gene3D - 103 160 - -
Accr13g00818 411 MobiDBLite consensus disorder prediction 1 38 - -
Accr13g00818 411 MobiDBLite consensus disorder prediction 63 98 - -
Accr13g00818 411 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 159 IPR006447 GO:0003677
Accr13g00818 411 SUPERFAMILY Homeodomain-like 102 158 IPR009057 -
Accr13g00818 411 MobiDBLite consensus disorder prediction 386 411 - -
Accr13g00818 411 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 80 183 IPR046955 GO:0003700
Accr13g00818 411 MobiDBLite consensus disorder prediction 9 38 - -
Accr13g00818 411 MobiDBLite consensus disorder prediction 55 98 - -
Accr13g00818 411 FunFam Myb family transcription factor 102 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00818 Accr-Chr13 9182282 9184984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00818 92 211 G2-like Transcription Factor Family AT2G42660 53.333 6.34e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr13g00818 Myb_DNA-binding 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00818 - - pcin:129314274 439.884