Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00815 ATGGATGAGAGACAAAATGATGCAGGGCCCGCAGAACAAGGGCCATCAAACTCTTCATGGTGGCCATCAGACTTTGTTAAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGACCTTAAATAATAAAGAATCACCTAGACAGTTTGAGCAAAATGTTTTGTCACCTAATAGAGCATCGCAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCCGATAAAAGGCTCAAGGAAATTTTTGATAATATTCCTACTATGGATGAGATTCATGTTTTGGGTGGAGATGGTCTAAAGGCTGATGTCATTTTGGTGGACACTGAGAAAGATAAAAAATTATCTATGTTGAAGCAATTGATCGTGGCCCTAGTTAAAGGATTGAGCTCTAATCCAGCTGCAATAATAAAAAAGATAGCCGGACTTGTTTCTGATTTTTATAAGCGATCAAATGTGGAAAGTCCAGCAAAAGCTGCACTAGAGGAAAACTCCCACATGTTTGAGAATCGCGGTGCCCAGATACTGGGGCAAATAAAGAATGGTTCATGCCGTTGTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGTACGCTCATCGTGGGTTTTCCAAATGATGGAGATGTTGAATGTGTGGATTCATACAAGCATATGTCTGTGCTTGTTGTATTGAATTCTGTGGAACTGCTAGTTGATCTCATGCGATGCCCTGGTCAATTATTACCTCGATCAAACAAGGAAGTTTTCATGTCACATATTTCTGAAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAACAGTCCTTTATATGGGGTTTCAGATAAAGTGGATCCTGACAGCGCTGGAAAGGAGGAGAACCTGCCGTTCCAGAGGAGATTTGACACTTCTTCAAATATATCAGGCCTTTCTTTGCGAAATTTGATGTTACGGTCAAATACCAGTCTGGATAGGAAATTGAGTATTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACCGCTAGTTCCAGTCCAGAGCATCCATCCATCAAAGCACGTGGACAGTCCATTCTTAGCGGTGATCGGAAATCATTCAGAGAGTTTGCTGATGATGAGGCTGCATCAAGGTCAGATGGTGCATCTCCATCAGAAGCTCGTAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATCGGTGATGATATCGTAAGGGCTGTACGTGCAATGAATGAAACACTGAAGCAGAAGCGTCTTTTGACAGAGCGAGGGGATAATAGCTCATTCTCACCTTCTGCAAATGATACAAATAGGATGTCAGATTTTCTTCGAGATGGTCATGAGAGATCTTTGAATTCTCCTCCACCTGATCAAGTAAATTCCCAAAAAGCAATGTCATTACCCTCTTCACCGCATGGTTACAGGGGTCAGACATCTGAGAGAAGTGGACTATCGAGGTATGGAGTGAACGAATTGCAGTCAACATGGAATAAAGTCCTTGAATCTTCAATGTTTAATAATAAGCCCCTCTTACCATATGAAGAATGGAATATTGACTTCTCAGAAATAACTGTTGGAACGCGTGTTGGGATTGGGTTTTTTGGAGAAGTCTTCCGTGGTGTATGGAATGGCACAGAAGTTGCAATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTAAGCCGGCTCCGACATCCAAATGTGATTTTATTTCTTGGGGCGTGCACAAAGCCTCCACGCTTGTCAATGGTTACTGAGTACATGGAAAGGGGATCACTGTATTACTTGATCCATGTGAGCGGCCAAAAGAAGAAGCTTAACTGGCAGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACAGAATGAAGATAGTTCACCGTGACCTGAAAAGTGCAAATTGTCTGGTGAACAAGCATTGGACTGTGAAGATATGTGACTTTGGGCTTTCAAGGATCATGACAGAGTCTAATGTCAAAGACACTTCATCGGCTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGGAACGAACCATTGGATGAAAAATGCGATATATTTAGCCTGGGGGTGTTGATGTGGGAGCTTTGTACTTTGAGCAGGCCTTGGGAGGGTATTCCACCCGAAAGGGTGGTTTATGCCGTTGCTAACGAGGGGTCTAGACTGGACATTCCTGAAGGCCCGATAGGCAAGCTCATCGCAGATTGTTGGGCAGAACCAAACGAACGGCCAAGTTGTGAGGAGATCCTCTCTCGCTTGCCTGATTGCGAGTAG 2409 0.4292 MDERQNDAGPAEQGPSNSSWWPSDFVKKFGSVSLGSQEETLNNKESPRQFEQNVLSPNRASQILWRTGMLSEPIPNGFYSVIPDKRLKEIFDNIPTMDEIHVLGGDGLKADVILVDTEKDKKLSMLKQLIVALVKGLSSNPAAIIKKIAGLVSDFYKRSNVESPAKAALEENSHMFENRGAQILGQIKNGSCRCRAILFKVLADTVGLESTLIVGFPNDGDVECVDSYKHMSVLVVLNSVELLVDLMRCPGQLLPRSNKEVFMSHISEAGESDSAENDSCDSPLEPNSPLYGVSDKVDPDSAGKEENLPFQRRFDTSSNISGLSLRNLMLRSNTSLDRKLSISHSEPNIAIAFGRRSRRKVIAEQRTASSSPEHPSIKARGQSILSGDRKSFREFADDEAASRSDGASPSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQKRLLTERGDNSSFSPSANDTNRMSDFLRDGHERSLNSPPPDQVNSQKAMSLPSSPHGYRGQTSERSGLSRYGVNELQSTWNKVLESSMFNNKPLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTEVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMERGSLYYLIHVSGQKKKLNWQRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESNVKDTSSAGTPEWMAPELIRNEPLDEKCDIFSLGVLMWELCTLSRPWEGIPPERVVYAVANEGSRLDIPEGPIGKLIADCWAEPNERPSCEEILSRLPDCE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00815 802 SUPERFAMILY Protein kinase-like (PK-like) 523 797 IPR011009 -
Accr13g00815 802 Gene3D Transferase(Phosphotransferase) domain 1 629 802 - -
Accr13g00815 802 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Accr13g00815 802 CDD STKc_MAP3K-like 556 798 - -
Accr13g00815 802 ProSitePatterns Protein kinases ATP-binding region signature. 556 577 IPR017441 GO:0005524
Accr13g00815 802 MobiDBLite consensus disorder prediction 450 466 - -
Accr13g00815 802 MobiDBLite consensus disorder prediction 1 23 - -
Accr13g00815 802 Gene3D Phosphorylase Kinase; domain 1 543 628 - -
Accr13g00815 802 MobiDBLite consensus disorder prediction 480 511 - -
Accr13g00815 802 MobiDBLite consensus disorder prediction 445 511 - -
Accr13g00815 802 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 339 798 - -
Accr13g00815 802 FunFam Serine/threonine-protein kinase isoform 1 540 628 - -
Accr13g00815 802 MobiDBLite consensus disorder prediction 270 310 - -
Accr13g00815 802 MobiDBLite consensus disorder prediction 364 416 - -
Accr13g00815 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Accr13g00815 802 Pfam Protein tyrosine and serine/threonine kinase 551 798 IPR001245 GO:0004672|GO:0006468
Accr13g00815 802 ProSiteProfiles Protein kinase domain profile. 550 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00815 802 SMART serkin_6 550 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00815 Accr-Chr13 9122120 9130703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00815 1 802 MAP Kinase Kinase Kinase AT3G58640 69.118 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Accr13g00815 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00815 - - qsu:112032500 1294.64