Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00810 ATGCGTCCTCCGGTTAAGAAAACCATCTTTCTCAGAGATCAGGGCGTGGAAGTTTCCGTCAAGGAAGACGGATTTCATGGATCGTACTTCGAAGCGAAGGTGGTTTCTCAACTCGATAATGGCTTTTACGTCGTTAAGTACGAGACTTTGCTCGATGACTACAACGAGTCCCAATTTCTGACTGAAACTGTTTACCCTAAGGAGCTTCGTCCCCTGCCTCCGGTCATCTCTGTTCGCCGGTTTTCGGTTAATCAGAAAGTCGATGCCTTCGACAACGACGGATGGTGGCTCGGCGTTATCACCGGAAAAGATGGTCCCGGTAGGTATTTGGTGTATTTCGCTTCAACCGATCAGGAGATCGCGTACCCTGTCTCACAAATTAGGGTTCACCAGGACTGGATTAACGGCAAGTGGGTTCGCCCCAAGAAAGTTCAATCTTAG 441 0.4898 MRPPVKKTIFLRDQGVEVSVKEDGFHGSYFEAKVVSQLDNGFYVVKYETLLDDYNESQFLTETVYPKELRPLPPVISVRRFSVNQKVDAFDNDGWWLGVITGKDGPGRYLVYFASTDQEIAYPVSQIRVHQDWINGKWVRPKKVQS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00810 146 CDD Tudor_Agenet_AtDUF_rpt2_4 83 129 - -
Accr13g00810 146 CDD Tudor_Agenet_AtDUF_rpt1_3 16 74 - -
Accr13g00810 146 Gene3D - 2 81 - -
Accr13g00810 146 SMART agenet_At_2 8 77 IPR014002 -
Accr13g00810 146 SMART agenet_At_2 79 135 IPR014002 -
Accr13g00810 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 16 143 - -
Accr13g00810 146 Pfam Agenet domain 16 74 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00810 Accr-Chr13 9034578 9035018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00810 22 133 PHD Transcription Factor Family AT5G58610 27.068 8.69e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00810 - - gmx:121175082 176.407