Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00802 ATGGAAGAATTTGATTGGAGCTCTGGTGTTTGTGAAAATGCCTTAGAGAGAAGTTCTGATTGTTTTCTGGATAACTCTGCTGTAATAGGGAGACGGTTTGCTTCATATTCATCTCTGGTGTTGGATGGAGAAAAGGAAGAGCTTGTGGCTGCTCCGGTCAAACTGGAACGCAAGATTGTGTCCACTGAGAGAAGTGTTGAAAGTTTGAAGAGCCATAGCGAGGCAGAGAGGATGAGGAGAGCGAGGATTAATGCACATCTTGACACGCTTAGGGGTGTAGTTCCTGGTGCTAAGAAGATGGACAAAGCATCATTACTTGGCGAGGTTGTCAGAAATATGAAAGAGCTGAAAAGGAATGCGGCACAAGCATGTGAGGGTTTGATGATACCAACGGACAGTGATGAAATAAGAGTTGAAGAACAAGAGGATGGTTCTAATGGCTTCCCTTATTCGATCAAAGCATCACTGTGTTGTGAATATAAACCAGGGTTGTTGCCTGAATTAAAACAAGCATTTGATGCTCTTCATCTTAAGATAATGACAGCAGAAATTGCAACCTTGGAAGGAAGAATGAAGAATGTGTTTGTCATAATTAGCTGTAAAGAACACGACATCGAAGATTCTGCATATCGTCAGGTTCTTGCAGTGTCTGTTCATCAAGCTATTAGGTCTGTACTTGATAGATTCTCTTGTTCTGAAGATCTGTTAGGAACCAGAAAGAGACGGAGACTTTCTATATTCAGTTCATCACCTCTAGGAGATTTCTTATGA 771 0.415 MEEFDWSSGVCENALERSSDCFLDNSAVIGRRFASYSSLVLDGEKEELVAAPVKLERKIVSTERSVESLKSHSEAERMRRARINAHLDTLRGVVPGAKKMDKASLLGEVVRNMKELKRNAAQACEGLMIPTDSDEIRVEEQEDGSNGFPYSIKASLCCEYKPGLLPELKQAFDALHLKIMTAEIATLEGRMKNVFVIISCKEHDIEDSAYRQVLAVSVHQAIRSVLDRFSCSEDLLGTRKRRRLSIFSSSPLGDFL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00802 256 Gene3D - 62 124 IPR036638 GO:0046983
Accr13g00802 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Accr13g00802 256 PANTHER TRANSCRIPTION FACTOR BHLH30 37 246 IPR045847 GO:0003700|GO:0006355
Accr13g00802 256 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Accr13g00802 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 120 IPR036638 GO:0046983
Accr13g00802 256 SMART finulus 73 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00802 Accr-Chr13 8934022 8936014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00802 64 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.711 1.43e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr13g00802 HLH 4.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00802 - - gmx:100788819 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00802 13 8934022 8936014 Accr13g00802 13 8934022 8936014 ECH