Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00792 ATGAAGAGTGCTGCTGGAGGAGGAGAGATTGTTCAAGTTCAAGGAGGTCACATTGTTCGATCCACTGGTCGGAAAGATCGTCACAGTAAGGTTTATACCTCCAAAGGTCCTCGAGATCGAAGGGTTCGTTTATCGGCCCAAACAGCGATTCAGTTCTACGATGTTCAAGACCGGCTCGGCTACGACCGGCCCAGTAAAGCCGTCGATTGGCTCATCAAGAAGGCTAAATCCGCCATTGATAAGCTCGCCGAGCTTCCTCCATGGCAGCCTCAAGCCGAAGAAACTCACCAAGAGGAAAACCCTGAGGATTCTGAGGCTCCTTCCGGGTTTCTCCCACCGGCGATTAATTCTGACGCCATAGCTTTCTTCCCTACGAGTTCTGCAACTTCCTCCATCAATTTTCAGAGCTATCCCTCGGAGATAATCTCTAGAACAACAAATTCTGGTCAAGATCTTGGCCTGTCTCTTCATTCGTTCAATCAAACGGCTTCGAACGACGAAAACCTGTTCGGTGGTTCGAATCCGGCGGAATTCGAGTCGAATTTCCAGAGGATTTTCGAGTCTAATTCGTTGATAGGGCAAGGCTCGATGTTTCCTCAAAGGGGGACCCTTCAGTCCAGTTTTTCGCCGCTAGTTCGCGCGTGGAGCGACGTGCCTGTGGCTTCTTCGGAGCATCACCACCATCATAAGTCGCATCCTTCCATCTTCGGCGGCCGCTTTCACTCCGACGGCTTGCCGGAATTCTGCATTCCGACGAGAATTCAAGGCCAGCAACAAGAACCATCCTCTGCTTCCCCTAATTCTCACCACCACTAA 816 0.5098 MKSAAGGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAQTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPWQPQAEETHQEENPEDSEAPSGFLPPAINSDAIAFFPTSSATSSINFQSYPSEIISRTTNSGQDLGLSLHSFNQTASNDENLFGGSNPAEFESNFQRIFESNSLIGQGSMFPQRGTLQSSFSPLVRAWSDVPVASSEHHHHHKSHPSIFGGRFHSDGLPEFCIPTRIQGQQQEPSSASPNSHHH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00792 271 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 242 IPR005333 GO:0003700
Accr13g00792 271 MobiDBLite consensus disorder prediction 20 40 - -
Accr13g00792 271 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Accr13g00792 271 MobiDBLite consensus disorder prediction 84 111 - -
Accr13g00792 271 MobiDBLite consensus disorder prediction 1 40 - -
Accr13g00792 271 Pfam TCP family transcription factor 23 125 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00792 Accr-Chr13 8805669 8806484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00792 5 270 TCP Transcription Factor Family AT3G15030 38.614 1.42e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr13g00792 TCP 7.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00792 - - pcin:129295286 485.723