Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00774 ATGGTGGAATCCCAAGACAAAGAGCTTGCAGCAACAAGACTGCTTAATGCTCAAACCCAAATATGGAACCACACCTTCAACTTCATTATCTCAATGTCTTTGAAGTCAGCAATAGAGTTAAACATACCAGACATCATTCACAAGAATGGCAAGCCCATGCCTCTTCCCCTTCTCATCTCTTCCCTTCAAATCCACCCTTCTAAATCTCCATACATTCATCGCTTAATGCGAATCCTCACTCATTCTGGCTTCTTCTCTCTCCAGAAACTTCCACAAACTTCTAACCCTTTAGAAGAAGGCTATGTCCTAACTGAAGCCTCAACGCTTCTTCTCAAGGACCACCCCTTAAGTGCCACACCTTTCTTCCTTGCTATGCTGGACCCCGTCCTAAGAAAGCCCTGGTATGAGATCACCAATTGGTTCCAAAATGATGATCCGTCATCGTTTCACACGGCACATGGGAAGACGTTTTGGGAGTATGCTAAGGTTGACCCTAATTTTAATCATTTTTTCAATGAAGCCATGGCTAGTGATGCGAGCTTGGTGATAAGTGTGGTGATTGACAAGTGTAAAGAGGTGTTTAAGGGAATAAAGTCATTGGTCGATGTTGGGGGTGGCACTGGGACTGTGGCTAAGGCCATTGTTAGAGCCTTCCCAGAAATAGAATGTATTGTGTTTGATCTCCCACATGTTATTGATGGCCTACAAGATAGTAGAAATCTCAAGTTTGTCGGAGGGAACATGTTCGAGGCCATTCCTCCTTCTGATGCCATATTGTTGAAGTGGATCCTACATGATTGGAAAGACGAGGAGAGTCTGAGAATTCTGAAGAAATGCAAGGAGGGAATTGCAGGCAAAGGGAAAGCGGGAAAGGTGATTATAATAGACATGATAATAGAGAATGACAAGGGAGATGACCACATTACTGATAAATTGACTGAGAATCAATTGTTGTTTGATATGTTGATGATGGTTTTGCTTACTGGAAAAGAGAGGAATGAGACTGAATGGGCCAAGTTGATCGTCTCTGCTGGTTTTACTGATTACAAGATTTATCCAGTTCTGGGTTCACGATCTCTCATAGAGGTTTATCCATAA 1098 0.4262 MVESQDKELAATRLLNAQTQIWNHTFNFIISMSLKSAIELNIPDIIHKNGKPMPLPLLISSLQIHPSKSPYIHRLMRILTHSGFFSLQKLPQTSNPLEEGYVLTEASTLLLKDHPLSATPFFLAMLDPVLRKPWYEITNWFQNDDPSSFHTAHGKTFWEYAKVDPNFNHFFNEAMASDASLVISVVIDKCKEVFKGIKSLVDVGGGTGTVAKAIVRAFPEIECIVFDLPHVIDGLQDSRNLKFVGGNMFEAIPPSDAILLKWILHDWKDEESLRILKKCKEGIAGKGKAGKVIIIDMIIENDKGDDHITDKLTENQLLFDMLMMVLLTGKERNETEWAKLIVSAGFTDYKIYPVLGSRSLIEVYP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00774 365 Gene3D - 3 110 IPR036388 -
Accr13g00774 365 SUPERFAMILY "Winged helix" DNA-binding domain 13 115 IPR036390 -
Accr13g00774 365 Pfam O-methyltransferase domain 134 346 IPR001077 GO:0008171
Accr13g00774 365 FunFam Coniferyl alcohol 9-O-methyltransferase 4 110 - -
Accr13g00774 365 Gene3D Vaccinia Virus protein VP39 111 365 IPR029063 -
Accr13g00774 365 PANTHER O-METHYLTRANSFERASE 17 350 IPR016461 GO:0008168
Accr13g00774 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 364 IPR029063 -
Accr13g00774 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 365 IPR016461 GO:0008168
Accr13g00774 365 FunFam O-methyltransferase ZRP4 112 365 - -
Accr13g00774 365 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Accr13g00774 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00774 Accr-Chr13 8595731 8597330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00774 29 363 Monolignol Biosynthesis Gene Families AT5G54160 33.431 5.27e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00774 - K16040 qsa:O6P43_000776 484.567