Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr13g00772 | ATGCTGGATTCCATCCTAACAAAGCCTTGGTATGAGGTGGCTAACTGGTTCCAAAACGACGATCCGACACCGTTTGACACGGCACAGGGAAAGACGTTTTGGGCGTATGCTGGGGTTGAGCCTAAGCTTAACCATTCTTTCAATGAAGCCATGGCTAGTGATGCGAGGTTAGTGACTAGTGTGGTTATTGACAAGTGTAAGGGTGTATTCAAGGGATTAGATTCATTAGTGGATGTTGGCGGAGGTACTGGGACAGTGGCTAAGGCTATTTCCAAAGCATTTCCAGAAATACAATGTACAGCGTTCGATCTCCCACACGTTGTTGATGGTCTCCAAGGCAGTGGGAATCTCAAGTTTGTGGGAGGAAACATGTTCGAGGCAATTCCTCCTTCTGATAGCATACTTTTGAAGTGGATTCTGCATGATTGGAACGATGAGGAGTGTGTGAAGATACTGAAGAAGAGTAAGGAGGCAATTACAAGCAAAGGCAAAGAAGGGAAGGTGATTATAATAGACATGATGATGGAGGACTCTAAAGGAGATATTGATGATGAATCGGTTGAAACACAACTGTTCTTTGATATGTTGATGATGGTTTTGGTCTCTGGAAAAGAGAGGAATGAGGAAGAGTGGGCTCAGTTGATATTCTCTGCTGGTTTCAGTGACTATAAGATTACTCCTGTTCTTGGCTTAAGATCTCTCATTGAGGCTTTTCCATGA | 720 | 0.4375 | MLDSILTKPWYEVANWFQNDDPTPFDTAQGKTFWAYAGVEPKLNHSFNEAMASDARLVTSVVIDKCKGVFKGLDSLVDVGGGTGTVAKAISKAFPEIQCTAFDLPHVVDGLQGSGNLKFVGGNMFEAIPPSDSILLKWILHDWNDEECVKILKKSKEAITSKGKEGKVIIIDMMMEDSKGDIDDESVETQLFFDMLMMVLVSGKERNEEEWAQLIFSAGFSDYKITPVLGLRSLIEAFP | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr13g00772 | 239 | Gene3D | Vaccinia Virus protein VP39 | 1 | 239 | IPR029063 | - | |
| Accr13g00772 | 239 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 3 | 237 | IPR029063 | - | |
| Accr13g00772 | 239 | Pfam | O-methyltransferase domain | 10 | 221 | IPR001077 | GO:0008171 | |
| Accr13g00772 | 239 | FunFam | O-methyltransferase ZRP4 | 1 | 239 | - | - | |
| Accr13g00772 | 239 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 239 | IPR016461 | GO:0008168 | |
| Accr13g00772 | 239 | PANTHER | O-METHYLTRANSFERASE | 12 | 224 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr13g00772 | Accr-Chr13 | 8584181 | 8585275 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr13g00772 | 3 | 225 | Monolignol Biosynthesis Gene Families | AT5G54160 | 35.398 | 1.06e-43 | 149 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr13g00772 | - | K16040 | qsa:O6P43_000776 | 390.963 |