Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00758 ATGGAGGCTTGTTCAGAAGGAGAGAAGAAAAAGCCACCTGAGGGGGAGAATAAAACCAAGCGCAAAATGAAGACTGCTTTCCAGTTGGAGATTCTGGAGAAAACTTATGCTACCGAACCGTATCCATCCGAGGCATTGCGAGCAGAGCTATCAGCGAAATTGTGTCTTTCAGATCGTCAACTGCAGATGTGGTTTTGTCACCGCAGGTTGAAAGACAGAAAGACACCAGCAGCGAAGAAGCCGGGAGATGAATCGCCAACTGGAGCTGTGACTCCTACTCTGGCGCCAGTGGCTGATGCTGCTGAGCAGAAGCTAATGGGTGAAGGCGGACATGCGCGTGATTCCATTTCTGGGAAGAGGCCATACAGTCATATGGATCCACGGCGACCTGGTGTGGCCTTTCCTAATATTGGAGGGGGATTGCCAGCAATGGAGACTTACTATGAATCACACCAGTCCAAAGCTGAGCTGAAAGCAATTGCATTTATGGAAGCACAGTTAGGGGAGCCATTAAGAGAGGACGGGCCAATTCTGGGGATGGAATTTGATCCGTTGCCACCTGGTGCTTTTGGTGCACCAATAGGGCCTACTGCGATGGGGCAGCATAGACAATCTGGAAGGCCTTTTGAGGCTAAAATTTATGAACGAGTGGACAAGGGTGCTTCAAGGACTCTTCATGAATATAAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGGCATATGACTATGAGAGAGCCACTCCTAATCAATATGGTTCTCTTGATGGAATTCCACATGCAAGGACTTTATTATCTAGTGGGCAACAATTCCGTGATGAGAATGAAATTGCTTCCTATGGGTATGGATATCAGAATCCAATGCCAGGGTTAAATCTTTTGTCTCAGCAAGGCAGGCAGAATCATCTTCTACCTTCTGCTTCTAGGCAGAATGATAATGTTCCATGGAAAAACACGTTTGTGGATGTGCTTGCTGACTCTCATGTTGGACCTTACAATGCAGCTCAAATTGACAGCATGGTAACTCCCGTTGACCAGAAGGTTATCCATGAGGAGCAAATTTCACAGTTTCAGAAGAAGCGGAAGAATGAAGAGGCTAGATTGCAGCGGGAACTTGAGGCACAAGAGAAACGAATCAGAAAAGAGCTTGAAAAGCGGGATATTTTAAGGCAAAAGAGAGAAGAGCAAGTAAGGAAAGAGATGGAGAGGCATGAACGTGAAAGGCAGAAGGAAGAGGAAAGGATATTGCGTGAAAGACAGCGGGAAGAGGAGAGATACCAAAAAGAACAGAGGCGTGAACTTATGCGAAGGGAGAAGATTTTGCAGAAAGAGTCAATCAGAGCTGAGAAAAGGAAACAGAAGGAAGAAGTACGCAAAGAGAAAGAGGCAGCAAGGATCAGAGCAGCCAATGAGAGAGCTATTGCTCGCAAAATGGTAAAAGAATCAATGGAACTTATTGAAGATGAACGATTGGAATTGATGGAGTTAGCGGCATCTGAAAAGGGACTTTCTTCTATGTTGTCCCTTGACTACGAAACTTTACAGAACCTCGAATTATTTAAAGATGGGCGGGCTGCATTTCCACCTAAGACTGTACTTCTGAAAAGACCTTTCTCAATTCAACCTTGGTTGGATTCTGAGGAGAACATCGGAAACCTTTTGTTGGTTTGGAGGTTTTTGATCTCCTTTGCTGATGTTCTTGGGATTTGGCCATTCACCTTGGATGAATTTTTACAAGCTTTCCATGACCATGATCCTAGGTTGTTAGGCGAGATTCATATTGCTCTGTTCAGATCTATTATAAAAGATATTGAAGATGTTGCAAGAACTACTGGGGTAGGAGCTAATTATAACAGTGCTGTAAACCCTTGTGGGGGTCATCCACAAGTAGTTGAAGGGGCATATGTGTGGGGGTTTGATATAAGAAATTGGGAGCGACTCTTAAATCCATTGACATGGCCAGAAATTATGAGGCAATTTGCTTTATCAGCTGGATTTGGGCCACAATTAAAGAAAAGAATCACTGAGCTGGTGTATCCTTGTGATAACAGTCAGGGTATTAATGGTGAAGATGTTATTTCCAATCTACGTAGTGGCGTGGCTGTTGAAAATGCTGTTGCTGTCATGCAAGAAAAGGGTTTATCTAACCCAAGAAGATCTAGGCATCGTTTGACACCTGGAACTGTCAAGTTTGCAGCATTTCATGTCTTATCTCTTGAAGGAAGCAAGGGCCTCACCATATTGGAAACTGCAGATAAGATTCAGAAATCTGGACTTCGTGATCTTACAACAAGCAAAACTCCAGAGGCTTCTATTGCTGCTGCTTTGTCCAGGGACACAAAGCTTTTTGAAAGGACAGCTCCTTCGACATATTGTTTACGTCCTGCATATAGAAAGGACCCGGCTGATGGCGAGGCAAGCCTCTCAGCTGCTAGGGAAAGAATCAGGATATTCAAAAATGGACTTGTCAATGCAGAAGAACCAGATGACGGTGAAAGGGATGACAATTCGGAAATTGATATGGCAGAAGATCCTGAGGCTGATGATTTAGTAGATGAAACAAATAAAAAGGAGGCTTCTGATTTTGTGGAATCTAGTATGAACACTGTAGTCAAGAATAGAGAAGGCAGTGGTGAAATTTTGCAGACTCCTGAGGGTGGCAATGGACAAATGAACGAGGGTGTAGCATCAATTGTTGCTGGAGAATTTAATCAGGAGATTGCTGGTAGTGGCAATGTTGTAACTAAACCTGATCTGGAAGACACCATTATTGATGAAACTAATCCCGGTGAACCATGGGTTGAGGGGCTTATTGAAGGAGAATACTCAAACCTTAGTGTAGAAGAGCGACTTAATGCCCTTGTTGCTCTGATTGGTGTGGCAATCGAAGGAAATTCAATTCGTTTTGTTCTTGAGGAGCGTCTAGAAGCAGCAAATGCTTTAAGAAAGCAGATGTGGACAGAGTTGCAGCTTGATAGACACCGGATCAAAGAGGATGGCTTTTTTAAGGTGCAGTCTGCCCCTTGTGTGGGCAATAAGAATGAACCAACTCCTTCAATGTCACCCATGGAGGGTAAACAGAGCCCTTTGTTTAGTGTTGATGACAGGATTGACAAAACACTACCAACTCCCCCTGCCCAGCAATTACATTTAAATGATCTACTGGGCAATACTATTCCATCAGAAGTGAAAATAAAAATTCAAGACTATGCTGCCCCTGATAGTTATTCTTACCAACAATTAGGATCTGGTGCTGAAAAGTCAAAATCAAATTTCAAGGCATACATCGGTCAATTAGCAGAAGAAACTTATATTTATCGGTCATTGCCTCTTGGTTTGGATCGGAGACATAATCGATATTGGCAGTTCACTACTTGTGCTTCTCAAAATGATCCGGGCTGTGGTAGGGTATTTGTGGAGATGCACGATGGTTGTTGGAGGCTGATTGATTCTGAAGAGGGTTTTGATGCTCTCTTGGTGTCACTGGATGTACGTGGGATTAGGGAATCCCATTTGCACATGATGTTGCGACGAATCGAAATGTCCTTCAAGGAATCTGTTAGAAGGAATAAGTTGAGAAGACAAGATGGAGACACTGTTAAAACAGAAGCTTTTCAAATGGCTACCAAACATGGTTGCTGTGCGTCCAGGTACAGTACTGATTCAGAAGTGTCGGAGACATCAACATCTTTTGTGATTCAGCTGGGAAGGAATGATTCTGATAACCAAGATGCTTTGAGGAGGTACCAGGATTTTGAAAAGTGGATGCTGAAGGAAGGCCTGGATTCCTCAGTATTACATGCATTGAGGGCTGGGAAGAGAAGGGGTGGTCTTTTGCTGGGTATGTGTGATTACTGCCATGGGACCTATTTATCTGAAGAAATTCCATCTCCTTCCTGCTGTAGAACCCTTCGTACTTGTAAGAGCAACTTAAGCTCTTCTGAACATATGGGTCAATGTGAAGGAAAAGTGAAGATTACCAGTAATTATGCATTTAGTATCTCCCCCTCTTCTCCATTAAGAATGAGATTGCTTAAAGTGCTGTTGTCAATAGTTGAGGTTTCCATTCCGGAAGAAGCTCTTGAACCTAGCTGGACAGACAGCTATCGGAAGTCTTGGACTATCAAGCTGCATGCTTCTTCTTCCTCTGAAGAACTTCTTGAGATATTGACTATACTGGAGGGTGCTATCAAGAGGGATTATTTGGCTTCAAACTTCAAGACTACCACTGCTGTGGCGCTAAGGCTCATGGAACTTGACATCTCAATCTTTTATACCTTGGAGCAGAAGCGGGAGTCTGAAAAGGACAAGACAACTGATAATGTTATGAAGTTTCCGTCAAAATATGCTTCTGCCAAAATTGCCCAAGTTGCTGCTGGTACAGCTGAGACTTCACGTTTGGCTGGGCATGCCATGGTTGATCTGGGTGCTGGATTTACTAGCTACAGTCGAGGACAAAGGTCCCATGGACACGTCCGTGGTCGTTCTCATGGTGGGGGATCACAGGGAAGGATCATCAATTCAAGATCTGAATCTAGAAAGAAAGTTACTGCCACTAGTGGCAGGAGACTTGGACAGGGACTAAGATGGAAGGGGAAATCACGAGCTCGTGGTGGGCAGCGTCGCCCGCGTCTAAGCATCAAAAGTGGCAGGAAGAAACCAGCAGCTAAAGAGCGTGAGATTACTGTTGCGAGGGGTGCTCCCAAAGAGGAAGCAGGTGGTGTTTTTGTCAGGGAAGCTAGCAATGTAGCTGAAACCATTGGTTGTCAAATGGAGACTCCTGAAAATGCTGCTAGCAGCTCTGGGAGATCAGATTATGAGGAAGATAAATATCAAGTAACAGGTGACGAGAATGCTTATCTAATGGATAATAATGACGATGGCTATGATAGGTGTGGATTTAGTGGCAAGTCTGAGAATATGGTAGAAGGTATTAGCTTTAGTTTAGATGATGAAGAAGATGGGGATGACGACGAAGAAGAGGATATTGATGAGGACGAGGATGATGAACAGGTCGGTGTTGATGTCGAAGGTTTCATAAATGGGGATTCAGACATAGAAGAGAACGGGCAAGATGCAGAACAAAAGTTTGATCCAGATGGATTGATCTCTTCATCCTCAGAGTACAGCGGCTAG 5136 0.4393 MEACSEGEKKKPPEGENKTKRKMKTAFQLEILEKTYATEPYPSEALRAELSAKLCLSDRQLQMWFCHRRLKDRKTPAAKKPGDESPTGAVTPTLAPVADAAEQKLMGEGGHARDSISGKRPYSHMDPRRPGVAFPNIGGGLPAMETYYESHQSKAELKAIAFMEAQLGEPLREDGPILGMEFDPLPPGAFGAPIGPTAMGQHRQSGRPFEAKIYERVDKGASRTLHEYKFIPEQPTVRNEAYDYERATPNQYGSLDGIPHARTLLSSGQQFRDENEIASYGYGYQNPMPGLNLLSQQGRQNHLLPSASRQNDNVPWKNTFVDVLADSHVGPYNAAQIDSMVTPVDQKVIHEEQISQFQKKRKNEEARLQRELEAQEKRIRKELEKRDILRQKREEQVRKEMERHERERQKEEERILRERQREEERYQKEQRRELMRREKILQKESIRAEKRKQKEEVRKEKEAARIRAANERAIARKMVKESMELIEDERLELMELAASEKGLSSMLSLDYETLQNLELFKDGRAAFPPKTVLLKRPFSIQPWLDSEENIGNLLLVWRFLISFADVLGIWPFTLDEFLQAFHDHDPRLLGEIHIALFRSIIKDIEDVARTTGVGANYNSAVNPCGGHPQVVEGAYVWGFDIRNWERLLNPLTWPEIMRQFALSAGFGPQLKKRITELVYPCDNSQGINGEDVISNLRSGVAVENAVAVMQEKGLSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILETADKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCLRPAYRKDPADGEASLSAARERIRIFKNGLVNAEEPDDGERDDNSEIDMAEDPEADDLVDETNKKEASDFVESSMNTVVKNREGSGEILQTPEGGNGQMNEGVASIVAGEFNQEIAGSGNVVTKPDLEDTIIDETNPGEPWVEGLIEGEYSNLSVEERLNALVALIGVAIEGNSIRFVLEERLEAANALRKQMWTELQLDRHRIKEDGFFKVQSAPCVGNKNEPTPSMSPMEGKQSPLFSVDDRIDKTLPTPPAQQLHLNDLLGNTIPSEVKIKIQDYAAPDSYSYQQLGSGAEKSKSNFKAYIGQLAEETYIYRSLPLGLDRRHNRYWQFTTCASQNDPGCGRVFVEMHDGCWRLIDSEEGFDALLVSLDVRGIRESHLHMMLRRIEMSFKESVRRNKLRRQDGDTVKTEAFQMATKHGCCASRYSTDSEVSETSTSFVIQLGRNDSDNQDALRRYQDFEKWMLKEGLDSSVLHALRAGKRRGGLLLGMCDYCHGTYLSEEIPSPSCCRTLRTCKSNLSSSEHMGQCEGKVKITSNYAFSISPSSPLRMRLLKVLLSIVEVSIPEEALEPSWTDSYRKSWTIKLHASSSSEELLEILTILEGAIKRDYLASNFKTTTAVALRLMELDISIFYTLEQKRESEKDKTTDNVMKFPSKYASAKIAQVAAGTAETSRLAGHAMVDLGAGFTSYSRGQRSHGHVRGRSHGGGSQGRIINSRSESRKKVTATSGRRLGQGLRWKGKSRARGGQRRPRLSIKSGRKKPAAKEREITVARGAPKEEAGGVFVREASNVAETIGCQMETPENAASSSGRSDYEEDKYQVTGDENAYLMDNNDDGYDRCGFSGKSENMVEGISFSLDDEEDGDDDEEEDIDEDEDDEQVGVDVEGFINGDSDIEENGQDAEQKFDPDGLISSSSEYSG 1711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00758 1711 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Accr13g00758 1711 CDD homeodomain 18 75 IPR001356 GO:0003677
Accr13g00758 1711 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Accr13g00758 1711 MobiDBLite consensus disorder prediction 73 92 - -
Accr13g00758 1711 Pfam HB1, ASXL, restriction endonuclease HTH domain 727 794 IPR007759 GO:0006355
Accr13g00758 1711 Gene3D - 2 77 - -
Accr13g00758 1711 ProSiteProfiles HARE-type HTH domain profile. 727 796 IPR007759 GO:0006355
Accr13g00758 1711 MobiDBLite consensus disorder prediction 821 854 - -
Accr13g00758 1711 SMART HOX_1 17 79 IPR001356 GO:0003677
Accr13g00758 1711 Pfam Homeodomain 18 74 IPR001356 GO:0003677
Accr13g00758 1711 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1107 1179 IPR028941 -
Accr13g00758 1711 SMART testlast3 547 606 IPR018501 -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 1484 1560 - -
Accr13g00758 1711 SUPERFAMILY Homeodomain-like 13 74 IPR009057 -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 1642 1711 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 107 126 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 1646 1674 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 1007 1026 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 1010 1026 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 1 22 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 107 129 - -
Accr13g00758 1711 Coils Coil 443 474 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 1528 1550 - -
Accr13g00758 1711 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1407 1710 IPR044977 GO:0006357
Accr13g00758 1711 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 930 968 IPR028942 -
Accr13g00758 1711 Coils Coil 347 432 - -
Accr13g00758 1711 MobiDBLite consensus disorder prediction 828 849 - -
Accr13g00758 1711 Pfam DDT domain 548 603 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00758 Accr-Chr13 8450454 8462452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00758 7 1443 Homeobox Transcription Factor Family AT5G44180 49.734 0.0 1296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Accr13g00758 WSD 2.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00758 - - pcin:129313496 2459.49