Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00756 ATGCTTGCGGTATCACCTTTGAGGAGAACCAAAGATGAGATTAAAAGCCAGGGAGAGATGGGTGTTTTCTCATCTATCGTTGGAGAAGATGAAGAGTTTGGAGAATTTTCCGATGGGAGTTTATTGGAAAGCATTGATTTTGATGATATTTTTGTCGGTATCAACGTCGGCGCCGGAGATGAGCTGCCGGATTTCGAGATGGACCCAGAAATCCTCTTCGAGTTCTCCATGGAGTCGTCGGAGAACATGAACTGCTCTTCCTTGCTTTCATTGGAAAATAATAATGATAATGGAGCTGATCAACACCAGAATAGTATTGTAAACGGGAAGGAGGAGGATGAAGAAGAAGAAGATTGTAATAATAAAGCTTCGTCTGCTTCAGCTTCAAATTCTGGGTCAAGTAGGGCAGAAGAAGAGATAATGAACAAAAGAGATGAAACTGCGACTGCGACGTCGTTGAAGCCATCGGCGACGACCAAGGAAGGTGAGCAAAAGGGAAGAAAATCTTCACGCCAATCAAAAAATTCACAAGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTACACAGACGATTCGTGCAGGCAGTGGAGCAGCTTGGAGTGGACAAGGCAGTTCCTTCCAAAATCCTAGAGATTATGGGAATTACTAGTCTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATTTGCTGGCGCGTGAAGCTGAAGCAGCGAGGTGGAATAAGGGGAGAGAGGTAAGGCCATGGGCGGCGGCGGCCACTGTGGGTTTCCCTCATATGGCTCCTCCTCCGTCGCCGTCCACGATGCTGCCCCAATATTTCAGACCCTTGCATGTATGGGGCCATCCCTCGATGGACCATTACTCCTTTATGGCCCGCTGGCCGCCTCCCCCGGCCTGGCCATGCCCAACCGCTTCTCCTCCGCCACCTCCGGGCCCTTCATTCTGGCACCATCACTACCACCAGCAGGCTGATCCCCAAGCACTAACCCCAGGAATAGGAACATATTGTTTTCCACCACCAACATCACCTCTGACTACGACGGGATTTGGATCTTCACTACCTGTCCCTGGTATCCCACCCCACGGCATGTTCACGGCGGATCCTGATGTCGGATCTCCCACCGGTCAACCCGCCCGTCCATGGCCCGTCTTTGACTTCCACCCGTCAAAGGAAAGCATAGATGAAGCTTTTGGAGATGTTATATCAAAACCATGGCTTCCACTTCCTCTAGGGCTTAAAGCTCCGGCGCTTGATAGTGTGTTGAGCGAATTACAGAGACAAGGAATTCCCAAGATTCCTCCCTCTTGTGCTTGA 1344 0.5 MLAVSPLRRTKDEIKSQGEMGVFSSIVGEDEEFGEFSDGSLLESIDFDDIFVGINVGAGDELPDFEMDPEILFEFSMESSENMNCSSLLSLENNNDNGADQHQNSIVNGKEEDEEEEDCNNKASSASASNSGSSRAEEEIMNKRDETATATSLKPSATTKEGEQKGRKSSRQSKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSKILEIMGITSLTRHNIASHLQKYRSHRKHLLAREAEAARWNKGREVRPWAAAATVGFPHMAPPPSPSTMLPQYFRPLHVWGHPSMDHYSFMARWPPPPAWPCPTASPPPPPGPSFWHHHYHQQADPQALTPGIGTYCFPPPTSPLTTTGFGSSLPVPGIPPHGMFTADPDVGSPTGQPARPWPVFDFHPSKESIDEAFGDVISKPWLPLPLGLKAPALDSVLSELQRQGIPKIPPSCA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00756 447 MobiDBLite consensus disorder prediction 122 136 - -
Accr13g00756 447 FunFam Two-component response regulator 177 240 - -
Accr13g00756 447 Pfam Myb-like DNA-binding domain 184 233 IPR001005 -
Accr13g00756 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 178 237 IPR017930 -
Accr13g00756 447 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 446 IPR044825 GO:0003700|GO:0045893
Accr13g00756 447 NCBIfam myb-like DNA-binding domain, SHAQKYF class 181 235 IPR006447 GO:0003677
Accr13g00756 447 SUPERFAMILY Homeodomain-like 179 238 IPR009057 -
Accr13g00756 447 Gene3D - 178 239 - -
Accr13g00756 447 MobiDBLite consensus disorder prediction 109 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00756 Accr-Chr13 8427844 8431245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00756 1 293 G2-like Transcription Factor Family AT5G44190 40.193 1.77e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr13g00756 Myb_DNA-binding 2.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00756 - - pcin:129314514 548.895