Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00729 ATGGAAGCTCAAGGAAGCCATAACCAGCCTCCTCCGCCGCCGACCAAAGTCGAAAGAAAAATCGTTGAGAAAAATAGAAGAAACCAGATGAAGTCCCTCTACTCTAAGCTCAATTCTCTTCTCCCTAACCACAATCCCAAGGAACTACTGCAACTGCCTGATCAGATAGATCAGGCGATAAACTACATAAAGAGTTTGGAGGCGAAGGTGAAGATGGCTCAAGAGAAGAAAGAAAGCTTGACGGGAAAGAAAAGGTCATTTGCGAGCTGCTCAAGTAGTGCTATTGACATTAATAAGAACAAAAGTGTGGTGAGATCACCTCAAATTGAGATTCGTGAAGTGGGTTCGTCTCTAGAGATTGTTCTGATCACAGGGTTAGATAACCAGTTCGTTTTCTATGAGATCATTCGAATACTCCATGAAGAGAACATAGAGGTCGTTAGTGCTAACTCTTCTCTATTTGGCGACTCAATGCATCACGTAGTGCATGCAGAGATTGGGCAATCCTCTCTTCATTTCGGAGCAACCAAGGTAAGCCAGAGGCTAAAAACATTTGTGTATGGATCATCAAGTGATGTGGAAATAAACCCAGAGTTGTGGGATTTTGACTATATTGCTTCTGAACCCTGGGACTTCTAA 639 0.4288 MEAQGSHNQPPPPPTKVERKIVEKNRRNQMKSLYSKLNSLLPNHNPKELLQLPDQIDQAINYIKSLEAKVKMAQEKKESLTGKKRSFASCSSSAIDINKNKSVVRSPQIEIREVGSSLEIVLITGLDNQFVFYEIIRILHEENIEVVSANSSLFGDSMHHVVHAEIGQSSLHFGATKVSQRLKTFVYGSSSDVEINPELWDFDYIASEPWDF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00729 212 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 87 IPR036638 GO:0046983
Accr13g00729 212 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 66 IPR011598 GO:0046983
Accr13g00729 212 Coils Coil 56 83 - -
Accr13g00729 212 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 15 187 - -
Accr13g00729 212 Gene3D - 12 93 IPR036638 GO:0046983
Accr13g00729 212 SMART finulus 20 72 IPR011598 GO:0046983
Accr13g00729 212 MobiDBLite consensus disorder prediction 1 25 - -
Accr13g00729 212 FunFam Transcription factor bHLH162 6 92 - -
Accr13g00729 212 Pfam Helix-loop-helix DNA-binding domain 16 67 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00729 Accr-Chr13 8095320 8096305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00729 17 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.286 2.85e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr13g00729 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00729 - - gmx:100817883 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00729 13 8095320 8096305 Accr13g00729 13 8095320 8096305 ECH