Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00728 ATGAATTCAACCACCGTCGTCTTCAGAAACTCAGAAAGTAGCTTCTTCGCAAAACCAACAACCATAATGGAAGCTCAAGGAAGCCATAACCAGCCTCCTCCGCCGCCGACCAAAGTCGAAAGAAAAATCGTTGAGAAAAATAGAAGAAACCAGATGAAGTCCCTCTACTCTAAGCTCAATTCTCTTCTCCCTAACCACAATCCCAAGGAACTACTGCAACTGCCTGATCAGATAGATCAGGCGATAAACTACATAAAGAGTTTGGAGGCGAAGGTGAAGATGGCTCAAGAGAAGAAAGAAAGCTTGACGGGAAAGAAAAGGTCATTTGCGAGCTGCTCAAGTAGTGCTATTGACATTAATAAGAACAAAAGTGTGGTGAGATCACCTCAAATTGAGATTCGTGAAGTGGGTTCGTCTCTAGAGATTGTTCTGATCACAGGGTTAGATAACCAGTTCGTTTTCTATGAGATCATTCGAATACTCCATGAAGAGAACATAGAGGTCGTTAGTGCTAACTCTTCTCTATTTGGCGACTCAATGCATCACGTAGTGCATGCAGAGATTGGGCAATCCTCTCTTCATTTCGGAGCAACCAAGGTAAGCCAGAGGCTAAAAACATTTGTGTATGGATCATCAAGTGATGTGGAAATAAACCCAGAGTTGTGGGATTTTGACTATATTGCTTCTGAACCCTGGGACTTCTAA 705 0.427 MNSTTVVFRNSESSFFAKPTTIMEAQGSHNQPPPPPTKVERKIVEKNRRNQMKSLYSKLNSLLPNHNPKELLQLPDQIDQAINYIKSLEAKVKMAQEKKESLTGKKRSFASCSSSAIDINKNKSVVRSPQIEIREVGSSLEIVLITGLDNQFVFYEIIRILHEENIEVVSANSSLFGDSMHHVVHAEIGQSSLHFGATKVSQRLKTFVYGSSSDVEINPELWDFDYIASEPWDF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00728 234 FunFam Transcription factor bHLH162 28 114 - -
Accr13g00728 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 88 IPR011598 GO:0046983
Accr13g00728 234 Coils Coil 78 105 - -
Accr13g00728 234 Gene3D - 34 115 IPR036638 GO:0046983
Accr13g00728 234 SMART finulus 42 94 IPR011598 GO:0046983
Accr13g00728 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 109 IPR036638 GO:0046983
Accr13g00728 234 Pfam Helix-loop-helix DNA-binding domain 38 89 IPR011598 GO:0046983
Accr13g00728 234 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 37 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00728 Accr-Chr13 8095254 8096305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00728 39 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.286 4.87e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr13g00728 HLH 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00728 - - gmx:100817883 265.774