Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00726 ATGTCTTCCCCACTCATCTTTCTCTTTTCCTTCCTTATCCTTCTTTTCCTCCTCAGCTCATCTTCAGCTACTGAATTCATCTATAACACCAACTTCAGCTCTTCCAACATCCTTCTCTCCGGAAATGCTTCCCTCGATTCTTCAATTCTCACCCTCACCAACCTCACCTCCTTCTCCATAGGTCGAGCTTTTTACCCTTTTAAAATACCCACTAAACCCTCTAATTCTTCTTCCTCCCCTTTACCATTCTCAACCTCCTTCATTTTCTCTATTTCCCCCTTTAAACATATTCTCCCTGGACATGGATTCGTCTTCTTTCTCTCTCCTTTCACAGGAACAACCGGAGTAAGCTCTGCACAGCATTTGGGTCTCTTCAATCTCACCAATGACGGTAATCCCGACAACCATGTTTTTGGGGTTGAATTTGATGTGTTTAAGAACCAAGAGTTTAATGACATCGATGATAATCATGTGGGTTTGGATATAAATTCGCTTACTTCTTTTAGTTCGCATGCTGCGGGTTATTGGGTTGGGGAAGATGATGAGGAGTTTGAGGATTTGAAACTTAATGATGGGCATAACTATCAAGTTTGGATTGATTTTCTGGACTCTAGAATTAATGTGACTATGGCTCCTGTAGGAAGAAAGAGGCCTCGGAGACCCTTGATTAGTGAGCTTGTTAATCTTTCTTCGGTTCTTTTGGATGAAATGTATGTGGGATTTTGTGGGGCAACAGGGCAATTGGTGGAGAGTCACAAAATTTTGAGTTGGAGCTTTAGTAATTTGAATTTTTCGATTGGTGATGCTTTAGTTACTTCAAATTTGCCTTCTTTTTTACTTCCTAAAAGATCAGTTACAAGGTCAAAAGGTTTTATTATAGGAGTCAGTATGGGCATCTTCTTTGTCATTGGCAGCGCTAGTGTTATATTTGTACGTTTTCTTAGAGGGAAAACTAGCAAAAGAAACGAGGAAGAGACTGAAGATTGGGAATTAGAGTATTGGCCACACCAAATAAGTTATGAAGATATTCATGCTGCCACTAAAGGATTTTCAGACCAAAATATGGTTGGGTTTGGAGGGAATGGGAAAGTCTATAGAGGGATTTTACAAGGGGTAGAAGTTGCAGTAAAAAGAATCCCTTGTGAGAGTGAGAAAGGCATGAGGGAATTTCTGTCTGAAATCTCAAGTTTAGGCAGATTGAAGCACAGGAATGTGGTGCCATTGAGAGGTTGGTGTAAAAAAGAGAGAGGAAATTTGATTTTAGTCTATGACTATATGAGCAACGGAAGTTTGGACAAAAGGATATTTGGTGTTGATGAGAACAAAACTTTGACATGGGAGGAAAGAATCAAGGTGTTGAAGGATGTAGCTGATGGATTATTGTATTTGCATGAAGGTTGGGAAGTTAGTGTATTGCATAGAGACATCAAAGCAAGCAATGTTTTGCTTGATAAGGATATGAATGCCCGGTTGGGTGATTTCGGATTAGCTCGAATTTGTCATCATGGGCAGCCTACTAATACCACACAAGTGATTGGGACAGTTGGGTACATGGCACCTGAACTGGTTCAAAGAGGGAGAGCCTCAACTCATACTGATGTATTCAGTTTTGGTGTGTTGATTTTGGAGGTGGTATGTGGGAGAAGACCGACTGAACAAGATAAGCCAGGTTTGGTTGCTTGGGTTTGGAGGCTAATGGAGAGAGCAGAATTATATGATGCTCTTGATGAACATTTAAAGTGGAGGAGAGATCATGAAACTGAAGAAGCTGAGAGGGTTCTTCGTCTTGGTTTGTTGTGCACACTGCCTGAGCCTTGTGCTAGGCCTACTATGAGACAGGTCGTGATGGTGTTGGAAGAAGAGGATCTGAGCTTGATTGAAAAATTAAATTCTGCTGCCACCTCTGCTGTAAAGGCTGCGAGCTTCAGTTTTCACCCTACAGTTGAGGAAATTTCCCGGTCCCGTATCTCTTTCACAACGCAGGAGGGTCGATGA 1995 0.415 MSSPLIFLFSFLILLFLLSSSSATEFIYNTNFSSSNILLSGNASLDSSILTLTNLTSFSIGRAFYPFKIPTKPSNSSSSPLPFSTSFIFSISPFKHILPGHGFVFFLSPFTGTTGVSSAQHLGLFNLTNDGNPDNHVFGVEFDVFKNQEFNDIDDNHVGLDINSLTSFSSHAAGYWVGEDDEEFEDLKLNDGHNYQVWIDFLDSRINVTMAPVGRKRPRRPLISELVNLSSVLLDEMYVGFCGATGQLVESHKILSWSFSNLNFSIGDALVTSNLPSFLLPKRSVTRSKGFIIGVSMGIFFVIGSASVIFVRFLRGKTSKRNEEETEDWELEYWPHQISYEDIHAATKGFSDQNMVGFGGNGKVYRGILQGVEVAVKRIPCESEKGMREFLSEISSLGRLKHRNVVPLRGWCKKERGNLILVYDYMSNGSLDKRIFGVDENKTLTWEERIKVLKDVADGLLYLHEGWEVSVLHRDIKASNVLLDKDMNARLGDFGLARICHHGQPTNTTQVIGTVGYMAPELVQRGRASTHTDVFSFGVLILEVVCGRRPTEQDKPGLVAWVWRLMERAELYDALDEHLKWRRDHETEEAERVLRLGLLCTLPEPCARPTMRQVVMVLEEEDLSLIEKLNSAATSAVKAASFSFHPTVEEISRSRISFTTQEGR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00726 664 FunFam L-type lectin-domain containing receptor kinase S.4 426 631 - -
Accr13g00726 664 SMART serkin_6 350 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00726 664 SUPERFAMILY Protein kinase-like (PK-like) 326 618 IPR011009 -
Accr13g00726 664 ProSiteProfiles Protein kinase domain profile. 350 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00726 664 CDD lectin_legume_LecRK_Arcelin_ConA 24 260 IPR001220 GO:0030246
Accr13g00726 664 Gene3D Phosphorylase Kinase; domain 1 313 425 - -
Accr13g00726 664 CDD STKc_IRAK 356 620 - -
Accr13g00726 664 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 311 425 - -
Accr13g00726 664 ProSitePatterns Protein kinases ATP-binding region signature. 356 377 IPR017441 GO:0005524
Accr13g00726 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Accr13g00726 664 Gene3D Transferase(Phosphotransferase) domain 1 426 637 - -
Accr13g00726 664 PANTHER - 36 621 - -
Accr13g00726 664 Gene3D - 22 270 - -
Accr13g00726 664 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Accr13g00726 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 15 260 IPR013320 -
Accr13g00726 664 Pfam Legume lectin domain 24 261 IPR001220 GO:0030246
Accr13g00726 664 Pfam Protein kinase domain 351 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00726 Accr-Chr13 8040984 8042978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00726 22 569 Receptor kinase-like Gene Family AT4G04960 61.302 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr13g00726 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00726 - - gmx:100814167 934.865