LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr13g00725	ATGGAAATGCATTCCAAAATAACCTCACTTGCTCTTTTCTACCTTATCACCCTTCTTCTTCGCTCGAGCTCTGTGTCTGCGACAGAATTTGTCTACAACACAAACTTCAATTATTCTAACATCTTCCTCTGTGGAAACTCTTCTATTCAGTCTTCCATTCTGGTTCTTACCAATCGAAGCTTCTTCACCATAAACCGAGCTTTTTACCCTTACAAAATACCCACTAAAGACGCTAACTCTTCTGCTCTTCTTCCCTTTGCAACTTCCTTCATTTTCTCTATAGCTCCCATTAAGCATTTTCTCACTGGTCATGGCTTTGCTTTCATATTCTCACCTACTAGGGGCTTAAATGGCACGACCTCGTCTCAGTACATTGGATTCTTGAACTTCACTAATCAAGGTAATCCTCAAAACCATGCTTTTGGAGTTGAGTTTGATGTCAGAAAAAATGTAGAATTCAATGACATAAACGACAATCATGTTGGCATAGACATAAACTCTCTTACTTCCTTAACTTCACATGACGCTGGTTATTGGGGTGGGAAAAATGATGAGGAATTCAAGAGGTTGAAGTTAAACAATGGAGTAAATTACCAGGTCTGGATTGAGTTTATGGATTCACAGCTTAATGTCAGAATGGCTCAAGCAGGAAGAAAAAGACCCAAGAAACCTCTGATTAGTAAGAATGTTAATCTCTTAGAAGTTTTTCTAGATCAAATGTATGTTGGGTTTTGTGCATCCACAGGTTTATTGATGGACACTACAAGAATCATGGCTTGGAGTTATAGTAATTCAAATTTTTCAATAGGTGATGCTTTGATCACAACCGATCTGCCTTCATTTGTGCATCAGAAAGGGTTTTTCTCTGGATCAAGAGCTCCTATTATAGGTTTAGTTGTTGTCTGCATGATACTCATAGGTTGTGTGTCTCTGGGGTTCTTCATTCTATGGAGATGGATAGGCAAATCAGAGGAAGATTTAGAAGAATGGGAATTAGAGTATTGGCCCCATAGGATTAATTACCAAGGGATTATTGCAGCAACAAGTGGGTTCTCAGAAAAGAAGGTGATAGGAGTAGGAGGGAATGGAAAAGTATACAAAGGGGTTTTGCAAGGAGAAAAAGTTGCAGTTAAGAGAATCTCTCATGAAACAGAAGCTGGAATAAGAGAGTTCTTGGCTGAAATTTCAAGCCTGGGAAGACTAAAACACAGAAATCTGGTAAACTTCAGAGGATGGTGCAAAAGAGAAAAAGGAAGTTTCATATTAGTCTATGATTACATGGAGAATGGAAGTTTAGACAAATGGATCTTTGAAAGAGATCATGAAGACAGAAAGATTCTGACTTGGGAAGAGAGGATTCAAGTTCTAAAGAATGTAGCCTCTGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCACAGAGACATCAAATCCAGCAATGTCCTACTCGACAAAGATATGAATGCAAGATTGGGAGATTTCGGATTGGCTCGCATGCATGATCATCATGGGCCAGTAGCAACCACAACAAAAGTGATTGGAACTATAGGGTACATAGCCCCAGAAGTGATCAAATCAGGAAGATCATCAACACGATCTGATGTTTTTGGTTTTGGAATATTGGTTTTAGAGGTGGTTTGTGGGAGAAGACCAATTGAAGAAGGTAAACCAGGTTTAATTGAGTGGTTAATGTCCCTAATGGAGATTGATGAGTTACACTTGGGTCTTGATGAGAGGTTGAAGGCCAAAGGAGGATGTGTTATCGAGGAAGTGGAAAGAATGATTCGTTTGGGTTTGGTTTGTGCAAATTCTGATCCCAATGTTAGGCCTACGATGAGGCAAGTGGTTAATATGCTGGAAGGAGAATTTGAAGGTAATGAGACAGAAGAGAACAGTAAGGGAGAAAATTTGCTTGAGAAAATAAAATCAGCAGCAACTTGGGATGGAACTGCTCTAGCTTTTTCTAACCTAAGACACCCAACATTTGATGACTTGATGTTTAGTTCTTATTCTAAAACTTCTAGAAGTAACTCAAATGCCATCCCAGAATCAGAGATCATCCTAGAAGAAGGAAGGTAG	2088	0.3932	MEMHSKITSLALFYLITLLLRSSSVSATEFVYNTNFNYSNIFLCGNSSIQSSILVLTNRSFFTINRAFYPYKIPTKDANSSALLPFATSFIFSIAPIKHFLTGHGFAFIFSPTRGLNGTTSSQYIGFLNFTNQGNPQNHAFGVEFDVRKNVEFNDINDNHVGIDINSLTSLTSHDAGYWGGKNDEEFKRLKLNNGVNYQVWIEFMDSQLNVRMAQAGRKRPKKPLISKNVNLLEVFLDQMYVGFCASTGLLMDTTRIMAWSYSNSNFSIGDALITTDLPSFVHQKGFFSGSRAPIIGLVVVCMILIGCVSLGFFILWRWIGKSEEDLEEWELEYWPHRINYQGIIAATSGFSEKKVIGVGGNGKVYKGVLQGEKVAVKRISHETEAGIREFLAEISSLGRLKHRNLVNFRGWCKREKGSFILVYDYMENGSLDKWIFERDHEDRKILTWEERIQVLKNVASGILYLHEGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLARMHDHHGPVATTTKVIGTIGYIAPEVIKSGRSSTRSDVFGFGILVLEVVCGRRPIEEGKPGLIEWLMSLMEIDELHLGLDERLKAKGGCVIEEVERMIRLGLVCANSDPNVRPTMRQVVNMLEGEFEGNETEENSKGENLLEKIKSAATWDGTALAFSNLRHPTFDDLMFSSYSKTSRSNSNAIPESEIILEEGR	695

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr13g00725	695	SUPERFAMILY	Protein kinase-like (PK-like)	329	623	IPR011009	-
	Accr13g00725	695	ProSitePatterns	Protein kinases ATP-binding region signature.	357	378	IPR017441	GO:0005524
	Accr13g00725	695	PANTHER	-	45	626	-	-
	Accr13g00725	695	SUPERFAMILY	Concanavalin A-like lectins/glucanases	15	265	IPR013320	-
	Accr13g00725	695	FunFam	L-type lectin-domain containing receptor kinase S.4	427	635	-	-
	Accr13g00725	695	Gene3D	Phosphorylase Kinase; domain 1	320	426	-	-
	Accr13g00725	695	FunFam	L-type lectin-domain containing receptor kinase V.9	26	272	-	-
	Accr13g00725	695	Pfam	Legume lectin domain	28	266	IPR001220	GO:0030246
	Accr13g00725	695	Gene3D	Transferase(Phosphotransferase) domain 1	427	649	-	-
	Accr13g00725	695	MobiDBLite	consensus disorder prediction	676	695	-	-
	Accr13g00725	695	CDD	lectin_legume_LecRK_Arcelin_ConA	28	265	IPR001220	GO:0030246
	Accr13g00725	695	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	474	486	IPR008271	GO:0004672\|GO:0006468
	Accr13g00725	695	SMART	serkin_6	351	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr13g00725	695	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	316	426	-	-
	Accr13g00725	695	CDD	STKc_IRAK	357	624	-	-
	Accr13g00725	695	Gene3D	-	26	270	-	-
	Accr13g00725	695	ProSiteProfiles	Protein kinase domain profile.	351	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr13g00725	695	Pfam	Protein kinase domain	351	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr13g00725	Accr-Chr13	8034886	8036973	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr13g00725	25	571	Receptor kinase-like Gene Family	AT4G04960	58.228	0.0	617

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Accr13g00725		Pkinase	1.6e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr13g00725	-		-	gmx:100804553	895.96