Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00724 ATGGGTTGCATATGTTCCAAGACATCGGCTGTAGAAGACAGCCGTGAAGATTTGACAAAGAAATCATTATCTAGCCAGAGAGGGTCAGAGCTGCGTGTTTCAAGGTTGAATTCCTCTAAAAGAAACGAGGGGATTTGGGAAACAGATAAGTTAGTTGGAAATGATGTGAAGATTTCATTGATTGACAAGAAAACCAATGGCTCATTTCAGTTGCGTGATGATCAAGTGGGGAATAAGGAAATAGAGAAGCCTGAATTAGCTGTCCTGAACAATCCTGGTCTTGGAAAGGTTCCAAAGGCTGTAGAAGGAGAGCAAGTTGCAGCAGGATGGCCCAGTTGGCTTTCTTCTGTTGCAGGTGAAGCTATCAACGGATGGATACCTCGAAGCGCCAATACTTTTGAGAGGTTAAATAGAATTGGCCAAGGAACTTACAGTACTGTTTATAAAGCTCGTGATGTGACTCACCAAAAAATTGTTGCTTTGAAGAGAGTTCGGTTTGATAATCTTGATCCTGAGAGTGTAAAGTTTATGGCTAGGGAAATTCTCCTTCTGCGTAGACTCGACCATCCGAATATAATCAAGTTGGAAGGCTTGATAACATCTCAGACCTCTCACAGCTTGTACCTAATTTTTGAGTATATGGAACATGATCTTTCTGGACTAGCATCACGTCCTGGCATCAAGTTTTCTGAACCACAGGTTAAATGCTATATGCAACAACTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTGTCCTCCATCGTGACATAAAGGGCTCAAATCTTCTCATTGACAACAATGGCATCTTAAAAATTGCAGATTTTGGGTTGGCAAGTTTCTTTGACCCCGATCATAGTGTTCCATTGACCAGTCGAGTAGTTACTCTCTGGTATAGACCTCCCGAACTTTTACTTGGAGCAACTCATTATGGAGTTGCGGTAGATTTATGGAGCTCTGGTTGCATACTTGGGGAACTATATACTGGCAGGCCTATATTGCCAGGAAAAACTGAGGTTGAGCAACTGCACAGGATTTTCAAGCTTTGTGGATCACCTTCTGAGGACTATTGGCTTAAAGAGCGATTGCCACATGCTGCAGTATTCAGGCCTCCACACCGGTACAGACGAAGTATTACTGAAACATTTAAAGAATATCCATCTGTTTCAGTGAGGCTTATAGAGACACTACTTTCTATAGATCCAGCACAACGAGGGACAGCAGCCAGTGCTCTAAAGAGTGAGTTCTTCACTACAGAGCCCTTTGCTTGTGATCCATCAAGTTTACCGAAGTATCCTCCCAGCAAAGAGATTGATTCTAAGTTACGTGATGAAGAAACCAGAAGGCAAGGAGCTATCGGAGGAAGGGAGCAGAAAGCTCGCTCAGGAGCTAGAAAAGAAAAGGAACCTGGGATGACTATTCTATCAAATCCCTATGTCGACCCACGCATGTCAACCCGGGGACAACATTCCAATTCAAACAGCCAAAGTGAAGTGTTTCACCACCCTCACAGAGAACCTGTTTCTGGATTTTTGGTTTATCCCCCACAGAACCAGTCACATGTTAAAGATATGGAAAATAATTTCGGTGGGCATATTTACAAGAGGCCTTCACATTCAGGTCCACTTGTTCCGGGTATCCAATTATCAAGGGGCGGAAAGGAAGTTGACGAAGGGCCTCTTGGTTCTAACAGAATCAACTTGTCAAAACTATCTGGCTTAGTTTCATCGAGGACGACTTCATCTGAAGATCGAGAGAAAAAACCAGTTTCTCTGCTTCCTAGAAAAACAATTGAAGTTAAAAAACCTGTGGAGTCAACTAATAATGTATTAGAGTCAAGAAGGCATGATAAGAAACGCCACTCCCCACGAATTTTGGATTTCAATCAGATAGACAATGCAAGAGGCTCCACTCAAGAATTAACTCCGGGAGGCCGTGGGTACATGGAAAACAAGATTTATCTCTCTGGTCCTTTACTAGCATCTTCAAACATGGATCAGATGCTTAAAGAGCACGATCGAAAGATCCAAGAATTTTCAAGACGAGCACGAATTGACAAGTCAAGGGGTGGGAAATTTCGTGCACATAGAAAGTAG 2097 0.4273 MGCICSKTSAVEDSREDLTKKSLSSQRGSELRVSRLNSSKRNEGIWETDKLVGNDVKISLIDKKTNGSFQLRDDQVGNKEIEKPELAVLNNPGLGKVPKAVEGEQVAAGWPSWLSSVAGEAINGWIPRSANTFERLNRIGQGTYSTVYKARDVTHQKIVALKRVRFDNLDPESVKFMAREILLLRRLDHPNIIKLEGLITSQTSHSLYLIFEYMEHDLSGLASRPGIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPDHSVPLTSRVVTLWYRPPELLLGATHYGVAVDLWSSGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKERLPHAAVFRPPHRYRRSITETFKEYPSVSVRLIETLLSIDPAQRGTAASALKSEFFTTEPFACDPSSLPKYPPSKEIDSKLRDEETRRQGAIGGREQKARSGARKEKEPGMTILSNPYVDPRMSTRGQHSNSNSQSEVFHHPHREPVSGFLVYPPQNQSHVKDMENNFGGHIYKRPSHSGPLVPGIQLSRGGKEVDEGPLGSNRINLSKLSGLVSSRTTSSEDREKKPVSLLPRKTIEVKKPVESTNNVLESRRHDKKRHSPRILDFNQIDNARGSTQELTPGGRGYMENKIYLSGPLLASSNMDQMLKEHDRKIQEFSRRARIDKSRGGKFRAHRK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00724 698 MobiDBLite consensus disorder prediction 427 501 - -
Accr13g00724 698 Pfam Protein kinase domain 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00724 698 MobiDBLite consensus disorder prediction 436 468 - -
Accr13g00724 698 MobiDBLite consensus disorder prediction 479 498 - -
Accr13g00724 698 MobiDBLite consensus disorder prediction 676 698 - -
Accr13g00724 698 Gene3D Transferase(Phosphotransferase) domain 1 216 454 - -
Accr13g00724 698 SMART serkin_6 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00724 698 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Accr13g00724 698 PANTHER CELL DIVISION PROTEIN KINASE 131 422 - -
Accr13g00724 698 FunFam probable serine/threonine-protein kinase At1g54610 216 457 - -
Accr13g00724 698 Gene3D Phosphorylase Kinase; domain 1 120 215 - -
Accr13g00724 698 MobiDBLite consensus disorder prediction 16 35 - -
Accr13g00724 698 SUPERFAMILY Protein kinase-like (PK-like) 126 423 IPR011009 -
Accr13g00724 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Accr13g00724 698 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Accr13g00724 698 ProSiteProfiles Protein kinase domain profile. 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00724 698 CDD STKc_CDK9_like 133 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00724 Accr-Chr13 8029190 8033407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00724 125 499 Core Cell Cycle Gene Families AT5G10270 44.757 3.16e-114 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr13g00724 Pkinase 9.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00724 - - gmx:100814156 955.666