Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00699 ATGGATAGATTCACTAATGGAATTGATGACTCAAGCTCTGAGAGGCAACAATGGAAGCCAGTTTATGATGAAGCCTCCAAACCAATATATCATACCTTTGTTTCTGTGTCATCGTCTTCTTCAAGTATCACGTTTCCTTTTGCCCTTGATAAGTCTCCCTACCAACCTGCAGCCATAAATCATCAACTCATGAATTCTTTAGCACCTGATCATCATCATCATCCTCAGCAGCAGCAGTATCTTCGGCCATTACACACAACAAAGCTATACAGGGGAGTGAGGCAACGCCATTGGGGCAAATGGGTGGCTGAGATTCGTCTTCCCAACAGTAGAAATCGCCTCTGGTTAGGAACATTTGAAACTGCAGAAGATGCTGCTCTGGCTTATGATCGTGAGGCCTTTAAGCTCAGAGGACACAATGCCAAGCTCAATTTCCCTCACCTCTTTCTCAGTAAACCTCCAAATTCAAATGATTCTTCTTCTTCCTCATCAAAACAGCCTGAACCAGAAGAAGAGAATAATGAATTTCAGGAAACTGCTGGAGGTAATGAAACAGGGGAAGGTGTTGCAGAGGCAGGGGAATTGGTTTCAGGGAACATGGAGGCTTGGTACAAGGCTATTCCACAAGGTTGGGGACCTGAGAGCCCTGTGTGGGATGATTTATACGCCGCCAACAATCTTCTGTTTCAGTCATCATCACAGTTTGGTTTTGTGGATCCAAATTACCAACAAGAGTTTCATGATGTTAATAATAATGCTCAGGGACAAGAAGACAAGACAGGAACAGATTGTAGTTGTTCCGCTTCCTCCTCTGCTTGTCTCATGAAGCCTTTCTTTTGGAAGGATTAA 849 0.4382 MDRFTNGIDDSSSERQQWKPVYDEASKPIYHTFVSVSSSSSSITFPFALDKSPYQPAAINHQLMNSLAPDHHHHPQQQQYLRPLHTTKLYRGVRQRHWGKWVAEIRLPNSRNRLWLGTFETAEDAALAYDREAFKLRGHNAKLNFPHLFLSKPPNSNDSSSSSSKQPEPEEENNEFQETAGGNETGEGVAEAGELVSGNMEAWYKAIPQGWGPESPVWDDLYAANNLLFQSSSQFGFVDPNYQQEFHDVNNNAQGQEDKTGTDCSCSASSSACLMKPFFWKD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00699 282 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
Accr13g00699 282 MobiDBLite consensus disorder prediction 147 186 - -
Accr13g00699 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 20 221 - -
Accr13g00699 282 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Accr13g00699 282 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Accr13g00699 282 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Accr13g00699 282 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Accr13g00699 282 Pfam AP2 domain 90 139 IPR001471 GO:0003700|GO:0006355
Accr13g00699 282 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Accr13g00699 282 MobiDBLite consensus disorder prediction 150 167 - -
Accr13g00699 282 CDD AP2 88 148 IPR001471 GO:0003700|GO:0006355
Accr13g00699 282 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00699 Accr-Chr13 7782518 7783366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00699 78 221 AP2-EREBP Transcription Factor Family AT4G28140 58.503 7.92e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr13g00699 AP2 1.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00699 - - pcin:129312494 284.263